Co-expression analysis

Gene ID Zm.3573.1.A1_at
Gene name peroxidase 54
Homology with ArabidopsisSimilar to At5g06720: peroxidase, putative (HF=3e-3)
Module size 6 genes
NF 0.54
%ile 71.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99Zm.3573.1.A1_atCF629925peroxidase 54-3e-3At5g06720peroxidase, putativeO.I.H.G.S.X.
0.6077.80.98Zm.3376.1.A1_atAY104431.1hypothetical protein LOC100273263-5e-2At2g21730CAD2 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2)O.I.H.G.S.X.
0.5065.70.98Zm.6905.1.A1_a_atAF461814.1histone1a-6e-1At4g04620ATG8B (autophagy 8b)O.I.H.G.S.X.
0.5065.70.98Zm.5819.1.S1_atAI649779--6e-4At1g29900CARB (CARBAMOYL PHOSPHATE SYNTHETASE B)O.I.H.G.S.X.
0.5065.70.99Zm.6116.1.A1_atCK347339--9e-16At3g02320RNA binding / tRNA (guanine-N2-)-methyltransferaseO.I.H.G.S.X.
0.2622.70.99RPTR-Zm-M57289-1_s_atRPTR-Zm-M57289-1---O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.198.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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