Co-expression analysis

Gene ID Zm.3571.1.S1_at
Gene name Hypothetical protein LOC100193516
Homology with ArabidopsisSimilar to At4g17030: ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1) (HF=4e+0)
Module size 6 genes
NF 0.63
%ile 84.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.20.95Zm.3571.1.S1_atBG265645Hypothetical protein LOC100193516-4e+0At4g17030ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)O.I.H.G.S.X.
0.7389.90.96Zm.3570.1.A1_atBG840178--6e-1At1g54260histone H1/H5 family proteinO.I.H.G.S.X.
0.6785.80.95Zm.3569.1.A1_atCO518726hypothetical protein LOC100280101-5e+0At3g55600-O.I.H.G.S.X.
0.6785.80.95Zm.853.1.A1_atAI395965hypothetical protein LOC100276013-2e-12At4g01150unknown proteinO.I.H.G.S.X.
0.5775.10.95Zm.6703.1.A1_atCA398710hypothetical protein LOC100273224-1e+0At2g01120ORC4 (ORIGIN RECOGNITION COMPLEX SUBUNIT 4)O.I.H.G.S.X.
0.2521.30.94Zm.3572.1.A1_atBG873875harpin-induced protein-2e+0At2g14890AGP9 (ARABINOGALACTAN PROTEIN 9)O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6785.80.88Zm.4856.1.A1_a_atAY620402.1arginine/serine-rich splicing factor 1 variant 1-9e-3At2g46610arginine/serine-rich splicing factor, putativeO.I.H.G.S.X.
0.5571.60.90Zm.2069.1.S1_atBM347811hypothetical protein LOC100272824-2e-26At4g11820MVA1O.I.H.G.S.X.
0.4048.50.90Zm.6242.2.S1_atCF037850INDETERMINATE-related protein 9-5e+0At3g60280UCC3 (UCLACYANIN 3)O.I.H.G.S.X.
0.3336.00.89Zm.5981.1.S1_atCO526206calmodulin binding protein-1e-2At2g26180IQD6 (IQ-domain 6)O.I.H.G.S.X.
0.3336.00.92Zm.3430.1.A1_atAY110455.1--7e+0At5g02240binding / catalytic/ coenzyme bindingO.I.H.G.S.X.
0.3336.00.95Zm.6243.1.A1_atAI677547--7e-2At5g22460esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.3029.80.92Zm.1661.1.A1_atBM07968150S ribosomal protein L27-5e-1At1g15840unknown proteinO.I.H.G.S.X.
0.2115.50.89Zm.14864.1.A1_atAI737336--8e-1At3g18160peroxin-3 family proteinO.I.H.G.S.X.
0.158.60.92Zm.4675.1.S1_atBM075189flavoprotein wrbA-4e-1At4g36750quinone reductase family proteinO.I.H.G.S.X.
0.147.70.89Zm.9038.1.S1_atBM331839--1e+0At2g44530ribose-phosphate pyrophosphokinase, putative / phosphoribosyl diphosphate synthetase, putativeO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.398.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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