Co-expression analysis

Gene ID Zm.3498.1.A1_a_at
Gene name metallothionein1
Homology with ArabidopsisSimilar to At5g64690: neurofilament triplet H protein-related (HF=2e+0)
Module size 6 genes
NF 0.41
%ile 46.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.93Zm.3498.1.A1_a_atCK367906metallothionein1-2e+0At5g64690neurofilament triplet H protein-relatedO.I.H.G.S.X.
0.6077.80.93Zm.2768.1.A1_atAW067159Hypothetical protein LOC100193535-1e+0At5g04760myb family transcription factorO.I.H.G.S.X.
0.5571.60.92Zm.13483.1.S1_atCO528023Hypothetical protein LOC100192840-2e+0At3g29970germination protein-relatedO.I.H.G.S.X.
0.3336.00.95Zm.12936.1.A1_atAY108987.1--7e-1At3g21338unknown proteinO.I.H.G.S.X.
0.3029.80.92Zm.1079.4.S1_x_atAY109373.1--2e-2At5g14740CA2 (CARBONIC ANHYDRASE 2)O.I.H.G.S.X.
0.2115.50.93Zm.12511.1.S1_atAW062063hypothetical protein LOC100276976-5e+0At5g53110-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.494.9GSM253278ZM_8d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.294.5GSM320438protocol: mRNA - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM253276ZM_8d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
2.993.8GSM320444protocol: mRNA - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM206317Right pulvinus control total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.592.6GSM320440protocol: mRNA - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM253265ZM_4d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
2.492.2GSM253275ZM_8d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
2.391.7GSM206329Right pulvinus control polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig2421_at, orthologous to the query gene, Zm.3498.1.A1_a_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4458.9Contig2421_atAt5g64690--7e-2At5g02380MT2B (METALLOTHIONEIN 2B)O.I.H.G.S.X.
0.6380.3Contig2750_s_atAt5g64690--4e-15At2g33150PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3)O.I.H.G.S.X.
0.6380.3Contig2748_atAt5g64690--1e-2At4g20130PTAC14 (PLASTID TRANSCRIPTIONALLY ACTIVE14)O.I.H.G.S.X.
0.6380.3Contig26180_atAt5g64690--4e+0At5g05690CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF)O.I.H.G.S.X.
0.5572.0Contig14353_atAt5g64690--9e-3At1g49950DNA-binding protein, putativeO.I.H.G.S.X.
0.5066.9Contig6587_s_atAt5g64690--1e-4At3g52470harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.4863.2Contig67_atAt5g64690--4e-40At2g3760060S ribosomal protein L36 (RPL36A)O.I.H.G.S.X.
0.2326.1HVSMEb0005F19r2_atAt5g64690--3e-1At4g09010APX4 (ASCORBATE PEROXIDASE 4)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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