Co-expression analysis

Gene ID Zm.3480.1.S1_at
Gene name octicosapeptide/Phox/Bem1p
Homology with ArabidopsisSimilar to At1g11880: transferase, transferring hexosyl groups (HF=3e+0)
Module size 24 genes
NF 0.38
%ile 41.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6986.50.96Zm.3480.1.S1_atAW355987octicosapeptide/Phox/Bem1p-3e+0At1g11880transferase, transferring hexosyl groupsO.I.H.G.S.X.
0.5267.30.97Zm.14687.1.S1_s_atCA828256hypothetical protein LOC100272479-3e-1At2g15770glycine-rich proteinO.I.H.G.S.X.
0.5166.40.97Zm.18051.1.A1_atCF631263--2e+0At3g13674unknown proteinO.I.H.G.S.X.
0.4961.90.97Zm.4002.1.A1_atCF623938hypothetical LOC542196-5e-28At2g1974060S ribosomal protein L31 (RPL31A)O.I.H.G.S.X.
0.4759.90.98Zm.3633.2.S1_x_atCF634876APx1 - Cytosolic Ascorbate Peroxidase-3e-28At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.4658.40.97Zm.10872.1.A1_atBM075104--1e-8At1g59990DEAD/DEAH box helicase, putative (RH22)O.I.H.G.S.X.
0.4352.80.97Zm.12236.1.A1_atCA830514hypothetical protein LOC100194199-5e+0At3g13970APG12B (AUTOPHAGY 12 B)O.I.H.G.S.X.
0.3945.60.97Zm.6964.1.S1_atAI665995--6e-2At4g22320unknown proteinO.I.H.G.S.X.
0.3945.60.97Zm.4001.1.A1_atAY243475.1superal1-7e-16At1g17730VPS46.1 (VACUOLAR PROTEIN SORTING 46.1)O.I.H.G.S.X.
0.3742.30.97Zm.9989.1.A1_atBM332236DNA binding protein-5e+0At5g03090unknown proteinO.I.H.G.S.X.
0.3742.30.97Zm.540.1.A1_atAF244674.1glutathione transferase9-5e-1At2g01640unknown proteinO.I.H.G.S.X.
0.3641.30.97Zm.4623.1.S1_atAI372203Hypothetical protein LOC100217143-6e-2At1g68020ATTPS6O.I.H.G.S.X.
0.3641.30.97Zm.16178.1.A1_s_atBM347672hypothetical protein LOC100275193 /// hypothetical protein LOC100276703-3e-5At4g39235unknown proteinO.I.H.G.S.X.
0.3437.20.98Zm.7709.1.A1_atBM269078hypothetical protein LOC100280092-5e-1At1g71695peroxidase 12 (PER12) (P12) (PRXR6)O.I.H.G.S.X.
0.3336.00.97Zm.4182.1.S1_atCF631780hypothetical protein LOC100276027-1e-4At5g54855pollen Ole e 1 allergen and extensin family proteinO.I.H.G.S.X.
0.3336.00.97Zm.3486.2.A1_atAY111804.1--3e-1At5g52545unknown proteinO.I.H.G.S.X.
0.3233.40.98Zm.11605.1.A1_atBM379262--4e+0At4g11930unknown proteinO.I.H.G.S.X.
0.3029.80.97Zm.1377.1.A1_atBG873710hypothetical protein LOC100275345-2e+0At2g46460nucleic acid bindingO.I.H.G.S.X.
0.2928.10.97Zm.5207.1.S1_atAY107278.1hypothetical protein LOC100192596-5e-23At4g03120proline-rich family proteinO.I.H.G.S.X.
0.2928.10.97Zm.7564.1.A1_atBM078962--4e-1At3g59060PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6)O.I.H.G.S.X.
0.2724.60.97Zm.12992.1.A1_atCA402979--2e+0At3g17365catalytic/ methyltransferaseO.I.H.G.S.X.
0.2622.70.96Zm.6054.2.S1_atAY104332.1--6e-4At2g41740VLN2 (VILLIN 2)O.I.H.G.S.X.
0.2521.30.98Zm.4385.1.S1_atBQ487047small nuclear ribonucleoprotein-associated protein B-3e-15At5g44500small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putativeO.I.H.G.S.X.
0.2419.80.97Zm.13771.1.A1_atAY105545.1hypothetical protein LOC100216812-1e-17At1g72710CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
35.499.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
19.199.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
19.199.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.399.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.499.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.199.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.398.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.898.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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