Co-expression analysis

Gene ID Zm.3441.1.A1_at
Gene name hypothetical protein LOC100193908
Homology with ArabidopsisSimilar to At4g33467: unknown protein (HF=4e-1)
Module size 6 genes
NF 0.27
%ile 22.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.99Zm.3441.1.A1_atCN844939hypothetical protein LOC100193908-4e-1At4g33467unknown proteinO.I.H.G.S.X.
0.5571.60.99ZmAffx.912.1.S1_atAI770956--5e-2At4g01580transcriptional factor B3 family proteinO.I.H.G.S.X.
0.3131.60.99ZmAffx.877.1.S1_atAI770795--8e-1At5g16240acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.H.G.S.X.
0.3131.60.99Zm.18808.1.A1_atCO526738--1e+0At1g02840SR1O.I.H.G.S.X.
0.136.80.99ZmAffx.151.1.S1_atAI667841--2e-10At1g50140ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.
0.125.90.99Zm.17818.1.A1_atCK145213--6e+0At5g52470FIB1 (FIBRILLARIN 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.797.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.696.4GSM202302B73xMo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os01g0936100, orthologous to the query gene, Zm.3441.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7591.9Os01g0936100At4g33467-Serine/threonine-protein kinase PBS1 (EC 2.7.1.37)(AvrPphB susceptible protein 1)7e-30At5g13160PBS1 (avrPphB susceptible 1)O.I.H.G.S.X.
0.5068.0Os05g0556100At4g33467-SDL5A1e-43At3g61760ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B)O.I.H.G.S.X.
0.4660.9Os03g0227000At4g33467-Coatomer gamma subunit (Gamma-coat protein)(Gamma-COP)1e-25At4g34450coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putativeO.I.H.G.S.X.
0.4253.9Os01g0253100At4g33467-Pto kinase interactor 16e-12At4g02010protein kinase family proteinO.I.H.G.S.X.
0.4152.4Os02g0690700At4g33467-Clathrin adaptor complex, medium chain familyprotein3e+0At1g19770ATPUP14O.I.H.G.S.X.
0.4152.4Os07g0657200At4g33467-WD40-like domain containing protein3e-8At3g63460WD-40 repeat family proteinO.I.H.G.S.X.
0.4051.1Os03g0265700At4g33467-SH3 domain containing protein6e-50At2g07360SH3 domain-containing proteinO.I.H.G.S.X.
0.3948.3Os03g0791500At4g33467-Synaptobrevin family protein6e-26At1g11890SEC22O.I.H.G.S.X.
0.3948.3Os02g0135800At4g33467-Sec13-like protein (Fragment)6e-11At2g30050transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.3846.9Os02g0537900At4g33467-Vacuolar-type H+-translocating inorganicpyrophosphatase (EC 3.6.1.1)5e-87At1g16780vacuolar-type H+-translocating inorganic pyrophosphatase, putativeO.I.H.G.S.X.
0.3745.0Os05g0593800At4g33467-Casein kinase I (Fragment)4e-59At4g26100CK1 (CASEIN KINASE 1)O.I.H.G.S.X.
0.3541.7Os12g0104800At4g33467--2e-138At3g08530clathrin heavy chain, putativeO.I.H.G.S.X.
0.3541.7Os07g0546100At4g33467-Conserved hypothetical protein2e-2At1g11480eukaryotic translation initiation factor-relatedO.I.H.G.S.X.
0.3541.7Os03g0657000At4g33467-TATA-binding protein TBP26e-72At1g55520TBP2 (TATA BINDING PROTEIN 2)O.I.H.G.S.X.
0.3134.5Os04g0129500At4g33467-Sec23/Sec24 zinc finger domain containing protein7e-31At3g07100protein transport protein Sec24, putativeO.I.H.G.S.X.
0.3032.7Os08g0543600At4g33467-Conserved hypothetical protein2e-3At2g41260M17O.I.H.G.S.X.
0.2931.1Os02g0297600At4g33467-Protein of unknown function DUF707 family protein8e-20At1g67850unknown proteinO.I.H.G.S.X.
0.2831.1Os10g0470900At4g33467-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e-1At4g31430unknown proteinO.I.H.G.S.X.
0.2831.1Os01g0549700At4g33467-RNA helicase (Fragment)1e-111At5g11170ATP binding / ATP-dependent helicase/ helicase/ nucleic acid bindingO.I.H.G.S.X.
0.2524.1Os01g0920400At4g33467-Dynamin family protein1e-13At4g33650DRP3A (DYNAMIN-RELATED PROTEIN 3A)O.I.H.G.S.X.
0.2524.1Os03g0800100At4g33467-Cactin1e-22At1g03910-O.I.H.G.S.X.
0.1510.3Os04g0661900At4g33467--8e-44At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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