Co-expression analysis

Gene ID Zm.3428.1.A1_at
Gene name loricrin
Homology with ArabidopsisSimilar to At4g33560: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.44
%ile 52.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.89Zm.3428.1.A1_atAI964613loricrin-2e+0At4g33560unknown proteinO.I.H.G.S.X.
0.4658.40.89Zm.5925.1.A1_atBM269383hypothetical protein LOC100192024-1e-19At5g50460protein transport protein SEC61 gamma subunit, putativeO.I.H.G.S.X.
0.4048.50.92Zm.16900.1.A1_atBM339059--4e+0At1g64020serpin-related / serine protease inhibitor-relatedO.I.H.G.S.X.
0.3131.60.93Zm.5553.1.A1_atAI622659--7e-7At1g60200splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2928.10.92Zm.758.1.S1_atCK827705dehydrogenase/reductase SDR family member 2-4e-5At4g05530IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1)O.I.H.G.S.X.
0.2318.60.93Zm.2059.1.S1_atAI746127--1e-86At3g58610ketol-acid reductoisomeraseO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.598.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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