Co-expression analysis

Gene ID Zm.3421.1.A1_at
Gene name hypothetical protein LOC100191586
Homology with ArabidopsisSimilar to At1g08370: DCP1 (decapping 1) (HF=9e-2)
Module size 9 genes
NF 0.28
%ile 24.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5976.10.97Zm.3421.1.A1_atBG874132hypothetical protein LOC100191586-9e-2At1g08370DCP1 (decapping 1)O.I.H.G.S.X.
0.5369.10.97Zm.2232.1.S1_atBM380334hypothetical protein LOC100278893-2e+0At4g14805protease inhibitor/seed storage/lipid transfer protein (LTP)-relatedO.I.H.G.S.X.
0.5065.70.98Zm.6636.1.A1_atCF058269hypothetical LOC542699-9e-2At3g59280TXR1 (THAXTOMIN A RESISTANT 1)O.I.H.G.S.X.
0.4048.50.97Zm.223.1.A1_atAB024292.1histidine-containing phosphotransfer protein-2e+0At4g32860unknown proteinO.I.H.G.S.X.
0.3641.30.98Zm.5571.2.A1_a_atAY107402.1hypothetical protein LOC100194279-2e+0At3g11530vacuolar protein sorting 55 family protein / VPS55 family proteinO.I.H.G.S.X.
0.2521.30.97Zm.6681.1.A1_atBG837073wound induced protein-3e-1At4g28240wound-responsive protein-relatedO.I.H.G.S.X.
0.2216.90.97Zm.5236.1.A1_atAI615066hypothetical protein LOC100194156-1e-4At1g05730unknown proteinO.I.H.G.S.X.
0.169.40.98Zm.5366.1.A1_atAI621464--1e+0At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)O.I.H.G.S.X.
0.104.60.97Zm.2530.1.A1_atCF637153--7e-5At1g58350ZW18O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.499.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.998.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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