Co-expression analysis

Gene ID	Zm.34.4.A1_at
Gene name
Homology with Arabidopsis	Similar to At4g32780: phosphoinositide binding (HF=9e-1)
Module size	6 genes
NF	0.21
%ile	16.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.93	Zm.34.4.A1_at	AI667842	-	-	9e-1	At4g32780	phosphoinositide binding	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.95	Zm.17493.1.A1_at	CK145178	hypothetical protein LOC100272665	-	2e-3	At5g02540	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.96	Zm.14383.1.S1_at	AY109259.1	-	-	1e+0	At2g33780	VQ motif-containing protein	O.I.	H.G.	S.X.	Please select
0.12	5.9	0.96	Zm.19106.1.A1_at	CO049276	-	-	7e+0	At4g08039	-	O.I.	H.G.	S.X.	Please select
0.11	5.3	0.96	Zm.13405.1.A1_at	CF636947	hypothetical protein LOC100273586	-	1e-1	At4g22320	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	4.6	0.96	Zm.16911.1.A1_at	BM332269	-	-	3e-11	At4g27230	HTA2 (histone H2A)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.9	99.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.9	99.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.4	99.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.8	99.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.4	99.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.3	98.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.3	98.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.3	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.3	94.7	GSM320461	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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