Co-expression analysis

Gene ID Zm.3380.1.A1_at
Gene name hypothetical protein LOC100192837
Homology with ArabidopsisSimilar to At5g10300: MES5 (METHYL ESTERASE 5) (HF=7e+0)
Module size 12 genes
NF 0.62
%ile 82.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.96Zm.3380.1.A1_atBM382736hypothetical protein LOC100192837-7e+0At5g10300MES5 (METHYL ESTERASE 5)O.I.H.G.S.X.
0.8395.60.98Zm.15896.1.A1_atAY103971.1--4e-16At4g32010HSL1 (HSI2-LIKE 1)O.I.H.G.S.X.
0.7691.10.99Zm.5458.1.A1_atAY105574.1starch synthase IIc precursor-2e+0At3g01940unknown proteinO.I.H.G.S.X.
0.6381.10.99Zm.8950.1.A1_atAY109015.1--1e-17At2g18230AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2)O.I.H.G.S.X.
0.6381.10.99Zm.4020.1.A1_atCF637232hypothetical protein LOC100191912-2e-17At3g0711060S ribosomal protein L13A (RPL13aA)O.I.H.G.S.X.
0.6179.50.98Zm.5721.1.A1_a_atAY105083.1Hypothetical protein LOC100191423-9e-2At4g12460ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B)O.I.H.G.S.X.
0.5775.10.98Zm.5480.1.A1_atAY103756.1glycine-rich RNA-binding protein 7-5e-1At2g46000unknown proteinO.I.H.G.S.X.
0.5775.10.99Zm.7368.1.S1_atBM078103ERF/AP2 domain containing transcription factor-5e-2At3g57600AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.5571.60.98Zm.5491.1.A1_atAY111486.1--1e-5At2g37050kinaseO.I.H.G.S.X.
0.5267.30.98Zm.19026.1.A1_atAI619121hypothetical protein LOC100193145-2e-5At3g20250APUM5 (Arabidopsis Pumilio 5)O.I.H.G.S.X.
0.5065.70.98Zm.7275.1.A1_atBM336395hypothetical protein LOC100275154-8e-2At5g58220TTL (Transthyretin-Like protein)O.I.H.G.S.X.
0.3641.30.98Zm.11856.1.A1_atBM381264--3e+0At4g36260STY2 (STYLISH 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.098.2GSM253249ZM_12h_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
8.998.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM253246ZM_12h_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
4.396.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM323172Zm_SG200Dpep1_24hpi_IIIGSE12892Maize gene expression during infection with Ustilago maydis strain SG200Dpep1Link to GEO
2.492.2GSM206316Upper pulvinus 60 min total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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