Co-expression analysis

Gene ID Zm.3376.1.A1_at
Gene name hypothetical protein LOC100273263
Homology with ArabidopsisSimilar to At2g21730: CAD2 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2) (HF=5e-2)
Module size 8 genes
NF 0.42
%ile 48.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.98Zm.3376.1.A1_atAY104431.1hypothetical protein LOC100273263-5e-2At2g21730CAD2 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2)O.I.H.G.S.X.
0.6179.50.99Zm.3573.1.A1_atCF629925peroxidase 54-3e-3At5g06720peroxidase, putativeO.I.H.G.S.X.
0.5369.10.98Zm.5819.1.S1_atAI649779--6e-4At1g29900CARB (CARBAMOYL PHOSPHATE SYNTHETASE B)O.I.H.G.S.X.
0.4861.30.98Zm.6877.1.A1_atAW216051hypothetical protein LOC100193287-1e-11At5g61460MIM (hypersensitive to MMS, irradiation and MMC)O.I.H.G.S.X.
0.4048.50.98Zm.6905.1.A1_a_atAF461814.1histone1a-6e-1At4g04620ATG8B (autophagy 8b)O.I.H.G.S.X.
0.3233.40.98Zm.16848.2.A1_atCD437503hypothetical protein LOC100193258-1e-7At3g2223060S ribosomal protein L27 (RPL27B)O.I.H.G.S.X.
0.3029.80.98Zm.530.1.S1_atAF297046.1homocysteine S-methyltransferase-3-2e-10At3g25900HMT-1O.I.H.G.S.X.
0.2928.10.98RPTR-Zm-M57289-1_s_atRPTR-Zm-M57289-1---O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.492.2GSM206305Right pulvinus control polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.391.7GSM206306Lower pulvinus 2 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.391.7GSM206299Left pulvinus control polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.391.7GSM206307Lower pulvinus 5 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.291.3GSM206291Upper pulvinus 30 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.291.3GSM206287Left pulvinus control total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.291.3GSM206309Lower pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.291.3GSM206303Upper pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.291.3GSM206302Upper pulvinus 15 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.291.3GSM206308Lower pulvinus 15 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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