Co-expression analysis

Gene ID Zm.3332.1.A1_at
Gene name putative serine type endopeptidase inhibitor
Homology with ArabidopsisSimilar to At3g11650: NHL2 (HF=4e+0)
Module size 16 genes
NF 0.37
%ile 39.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.98Zm.3332.1.A1_atBM379802putative serine type endopeptidase inhibitor-4e+0At3g11650NHL2O.I.H.G.S.X.
0.5775.10.99ZmAffx.765.1.A1_atAI746076hypothetical protein LOC100279036-4e+0At5g11660unknown proteinO.I.H.G.S.X.
0.5571.60.99Zm.2368.1.S1_atAY109497.1plastidic phosphate translocator-like protein1-4e-21At4g32390phosphate translocator-relatedO.I.H.G.S.X.
0.5469.80.99Zm.6559.1.A1_atCF051688--3e-14At5g26830threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)O.I.H.G.S.X.
0.4455.70.99Zm.4299.1.S1_atCF046651hypothetical protein LOC100279924-5e-14At3g21630CERK1 (CHITIN ELICITOR RECEPTOR KINASE 1)O.I.H.G.S.X.
0.4048.50.99Zm.6207.3.A1_x_atCA40331860S ribosomal protein L15-3e-26At4g1739060S ribosomal protein L15 (RPL15B)O.I.H.G.S.X.
0.3538.90.99Zm.437.1.A1_a_atAF007580.1translation initiation factor-7e-162At1g54270EIF4A-2O.I.H.G.S.X.
0.3437.20.99ZmAffx.228.1.A1_atAI670240--5e-2At5g59000zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3233.40.99Zm.5267.1.A1_atBM340432copine-1-1e-11At3g01650RGLG1 (RING domain Ligase1)O.I.H.G.S.X.
0.3131.60.99Zm.2910.1.S1_a_atCK145276hypothetical protein LOC100217030 /// hypothetical protein LOC100277437-8e+0At5g02920ubiquitin-protein ligaseO.I.H.G.S.X.
0.3029.80.99Zm.6719.1.A1_atAI395930--8e-1At4g01960unknown proteinO.I.H.G.S.X.
0.2622.70.99Zm.19021.1.A1_atCO531319virulence-related protein Nf314-9e-7At2g35780scpl26 (serine carboxypeptidase-like 26)O.I.H.G.S.X.
0.2521.30.99Zm.8674.1.A1_atBM332208--1e+0At1g66475unknown proteinO.I.H.G.S.X.
0.2419.80.99Zm.11779.1.A1_atCO527258hypothetical protein LOC100217298-3e+0At3g47800aldose 1-epimerase family proteinO.I.H.G.S.X.
0.2318.60.99Zm.10314.1.S1_atCF016059origin recognition complex subunit 5-3e+0At3g58680MBF1B (MULTIPROTEIN BRIDGING FACTOR 1B)O.I.H.G.S.X.
0.2216.90.99Zm.15729.1.A1_atCD441496glucan endo-1,3-beta-glucosidase 4-2e+0At5g66180-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.897.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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