Co-expression analysis

Gene ID Zm.3283.2.A1_a_at
Gene name hypothetical protein LOC100192072
Homology with ArabidopsisSimilar to At3g46110: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.41
%ile 46.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.60.97Zm.3283.2.A1_a_atBM335982hypothetical protein LOC100192072-2e+0At3g46110unknown proteinO.I.H.G.S.X.
0.5571.60.97Zm.13931.1.A1_x_atZ35302.1--8e-1At1g09630ATRAB11C (ARABIDOPSIS RAB GTPASE 11C)O.I.H.G.S.X.
0.3131.60.98Zm.3930.1.S1_atBQ538158AMP-binding protein-8e-37At3g05970LACS6 (long-chain acyl-CoA synthetase 6)O.I.H.G.S.X.
0.2724.60.98Zm.9285.1.A1_atBM339972disease resistance response protein 206-6e+0At5g46874-O.I.H.G.S.X.
0.2622.70.98Zm.9900.1.A1_atBM351046--2e-2At5g28610-O.I.H.G.S.X.
0.2521.30.98Zm.17512.1.S1_atCF057479hypothetical protein LOC100192897-2e-9At4g25590ADF7 (actin depolymerizing factor 7)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.798.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig8273_at, orthologous to the query gene, Zm.3283.2.A1_a_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6985.5Contig8273_atAt3g46110--2e+0At5g03170FLA11O.I.H.G.S.X.
0.3647.1Contig104_x_atAt3g46110--7e-2At3g07230wound-responsive protein-relatedO.I.H.G.S.X.
0.2935.5Contig12953_atAt3g46110--1e-4At3g16980NRPB9AO.I.H.G.S.X.
0.2326.1Contig9753_atAt3g46110--3e-46At3g22880DMC1 (DISRUPTION OF MEIOTIC CONTROL 1)O.I.H.G.S.X.
0.1716.9Contig6962_atAt3g46110--1e-1At5g19473-O.I.H.G.S.X.
0.1716.9Contig1430_atAt3g46110--3e-54At4g27960UBC9 (UBIQUITIN CONJUGATING ENZYME 9)O.I.H.G.S.X.
0.1615.3HA11C13u_s_atAt3g46110--8e-4At1g73230nascent polypeptide-associated complex (NAC) domain-containing proteinO.I.H.G.S.X.
0.1514.1Contig19526_atAt3g46110--7e-1At4g32460-O.I.H.G.S.X.
0.1412.9Contig17862_atAt3g46110--1e+0At5g10550GTE2 (Global transcription factor group E 2)O.I.H.G.S.X.
0.1311.6HVSMEn0005L15f_x_atAt3g46110--9e+0At5g50430UBC33 (ubiquitin-conjugating enzyme 33)O.I.H.G.S.X.
0.1210.4EBem05_SQ003_G20_atAt3g46110--4e+0At5g09250KIWIO.I.H.G.S.X.
0.119.4Contig13840_atAt3g46110--2e-6At2g02880mucin-relatedO.I.H.G.S.X.
0.119.4Contig15746_atAt3g46110--2e+0At1g73890protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.108.4Contig12731_atAt3g46110--2e-4At3g59380FTA (FARNESYLTRANSFERASE A)O.I.H.G.S.X.
0.086.5Contig9551_atAt3g46110--1e-5At5g08170EMB1873 (EMBRYO DEFECTIVE 1873)O.I.H.G.S.X.
0.086.5Contig23814_atAt3g46110--1e+0At3g22580protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.086.5Contig12397_atAt3g46110--4e-2At2g24590splicing factor, putativeO.I.H.G.S.X.
0.086.5Contig17563_atAt3g46110--2e+0At4g01915unknown proteinO.I.H.G.S.X.
0.086.5Contig23073_atAt3g46110--2e-1At2g04622unknown proteinO.I.H.G.S.X.
0.075.8Contig11532_atAt3g46110--1e-22At2g42960protein kinase family proteinO.I.H.G.S.X.
0.064.8Contig13551_atAt3g46110--5e-4At1g22050MUB6 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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