Co-expression analysis

Gene ID	Zm.3134.2.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g23000: CIPK7 (CBL-INTERACTING PROTEIN KINASE 7) (HF=8e-1)
Module size	6 genes
NF	0.26
%ile	22.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	79.5	0.91	Zm.3134.2.A1_at	AI770607	-	-	8e-1	At3g23000	CIPK7 (CBL-INTERACTING PROTEIN KINASE 7)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.91	Zm.9605.1.A1_at	BM341116	-	-	1e+0	At1g15840	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.91	Zm.7870.1.S1_at	BU582061	activator of 90 kDa heat shock protein ATPase	-	1e-5	At3g12050	Aha1 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.90	Zm.13584.1.A1_at	AY107853.1	-	-	1e-72	At1g21640	NADK2	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.91	ZmAffx.205.1.A1_at	AI670190	hypothetical protein LOC100276892	-	8e-1	At4g17520	nuclear RNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.91	Zm.7370.1.A1_at	BM382341	beta-expansin 1a	-	5e-1	At1g20220	nucleic acid binding	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
21.7	99.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.7	99.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.5	99.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.8	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.9	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.9	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.6	98.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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