Co-expression analysis

Gene ID	Zm.3114.1.A1_at
Gene name	low-molecular-weight cysteine-rich protein LCR70
Homology with Arabidopsis	Similar to At5g01300: phosphatidylethanolamine-binding family protein (HF=6e+0)
Module size	6 genes
NF	0.42
%ile	48.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.1	0.96	Zm.3114.1.A1_at	CK827106	low-molecular-weight cysteine-rich protein LCR70	-	6e+0	At5g01300	phosphatidylethanolamine-binding family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.95	Zm.648.1.S1_at	AF144079.1	S-adenosyl-L-methionine:L-methionine S-methyltransferase	-	6e-19	At5g49810	MMT	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.96	Zm.7093.1.S1_at	BM341351	ribosomal protein S27	-	7e-21	At5g47930	40S ribosomal protein S27 (RPS27D)	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.96	Zm.17635.1.A1_s_at	CK367936	hypothetical protein LOC100277566	-	1e+0	At2g20260	PSAE-2 (photosystem I subunit E-2)	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.96	Zm.12084.1.A1_at	BM381384	ubiquitin domain containing 1	-	3e-10	At5g45740	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.94	Zm.9123.1.A1_at	BM347577	hypothetical protein LOC100275105	-	1e+0	At5g39620	AtRABG1 (Arabidopsis Rab GTPase homolog G1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.5	99.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.8	98.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.3	98.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.3	96.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.3	94.7	GSM202309	Mo17 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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