Co-expression analysis

Gene ID	Zm.3080.1.A1_at
Gene name	IAA13 - auxin-responsive Aux/IAA family member
Homology with Arabidopsis	Similar to At3g23050: IAA7 (INDOLE-3-ACETIC ACID 7) (HF=3e-15)
Module size	6 genes
NF	0.66
%ile	87.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	55.7	0.98	Zm.3080.1.A1_at	BM382308	IAA13 - auxin-responsive Aux/IAA family member	-	3e-15	At3g23050	IAA7 (INDOLE-3-ACETIC ACID 7)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.7728.1.A1_at	BM079644	-	-	3e-3	At2g33700	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.18115.1.A1_at	CN845273	ring domain containing protein	-	5e-1	At2g23780	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.98	Zm.12656.1.S1_at	CF010887	-	-	5e+0	At5g07020	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.98	Zm.8175.1.A1_at	BM382448	-	-	5e-6	At2g39350	ABC transporter family protein	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.98	Zm.6941.1.A1_at	CF638044	-	-	4e-1	At3g46770	transcriptional factor B3 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
28.7	99.7	GSM253277	ZM_8d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
7.1	97.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM253278	ZM_8d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
6.1	97.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.3	96.9	GSM253279	ZM_8d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
4.8	96.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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