Co-expression analysis

Gene ID Zm.3066.1.A1_at
Gene name hypothetical protein LOC100280011
Homology with ArabidopsisSimilar to At1g20620: CAT3 (CATALASE 3) (HF=7e-5)
Module size 6 genes
NF 0.60
%ile 79.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4048.50.97Zm.3066.1.A1_atM33103.1hypothetical protein LOC100280011-7e-5At1g20620CAT3 (CATALASE 3)O.I.H.G.S.X.
0.8094.00.98Zm.3755.1.A1_a_atAY104091.1derlin2-1 /// derlin2-2-8e-13At4g21810DER2.1 (DERLIN-2.1)O.I.H.G.S.X.
0.7792.10.97Zm.8568.1.S1_atBM267065--2e+0At1g06790RNA polymerase Rpb7 N-terminal domain-containing proteinO.I.H.G.S.X.
0.6785.80.97Zm.13209.1.A1_atCF630833cysteine proteinase inhibitor B-2e+0At4g18620-O.I.H.G.S.X.
0.4048.50.97Zm.10060.1.A1_atCK371531hypothetical protein LOC100217199-9e-18At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)O.I.H.G.S.X.
0.3844.20.97Zm.16356.3.S1_atBM076035protein transport protein SEC61 gamma subunit-3e-17At4g24920protein transport protein SEC61 gamma subunit, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.897.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM253256ZM_2d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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