Co-expression analysis

Gene ID Zm.2814.1.A1_at
Gene name zinc finger C-x8-C-x5-C-x3-H type family protein
Homology with ArabidopsisSimilar to At5g08100: L-asparaginase / L-asparagine amidohydrolase (HF=3e+0)
Module size 6 genes
NF 0.26
%ile 21.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4455.70.94Zm.2814.1.A1_atCB833930zinc finger C-x8-C-x5-C-x3-H type family protein-3e+0At5g08100L-asparaginase / L-asparagine amidohydrolaseO.I.H.G.S.X.
0.5571.60.95Zm.15106.1.A1_atAI065782--7e-1At2g29360tropinone reductase, putative / tropine dehydrogenase, putativeO.I.H.G.S.X.
0.5065.70.95Zm.7949.1.A1_atBQ538368hypothetical protein LOC100192737-2e+0At2g28480RNA bindingO.I.H.G.S.X.
0.1912.80.94Zm.11379.1.A1_atCB351163--5e+0At2g29995unknown proteinO.I.H.G.S.X.
0.1912.80.95Zm.3630.2.S1_atCO53143136.4 kDa proline-rich protein-3e+1At5g24770VSP2 (VEGETATIVE STORAGE PROTEIN 2)O.I.H.G.S.X.
0.115.30.95Zm.10125.1.A1_a_atCF628795cytidine/deoxycytidylate deaminase family protein-5e-1At5g29807unknown proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4352.80.92Zm.5375.1.A1_atAY107376.1beta-glucosidase-2e-6At3g18080BGLU44 (B-S GLUCOSIDASE 44)O.I.H.G.S.X.
0.3538.90.94Zm.9889.1.S1_atCF006010hypothetical protein LOC100272580-4e-1At1g21065unknown proteinO.I.H.G.S.X.
0.3336.00.92Zm.17231.1.S1_atCK369582--5e+0At4g27120unknown proteinO.I.H.G.S.X.
0.3336.00.94Zm.7674.1.A1_atBM268596hypothetical protein LOC100273721-1e-19At5g19920transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.3131.60.91Zm.194.1.S1_atX98498.1embryo surrounding region2 /// hypothetical protein LOC100275090-1e+0At1g35255unknown proteinO.I.H.G.S.X.
0.3131.60.96Zm.5502.1.A1_atBM378399hypothetical protein LOC100274214-1e-2At1g14330kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.3029.80.92Zm.17794.1.S1_atCK371286hypothetical protein LOC100274149-6e-6At4g18230-O.I.H.G.S.X.
0.2318.60.91Zm.9166.1.A1_atBM268864--2e-2At3g2483060S ribosomal protein L13A (RPL13aB)O.I.H.G.S.X.
0.2216.90.91Zm.10178.1.A1_atCO522741hypothetical protein LOC100274274-2e+0At3g24820BSD domain-containing proteinO.I.H.G.S.X.
0.136.80.93Zm.9497.1.A1_atCF243817hypothetical protein LOC100194267-4e-11At4g30930NFD1 (NUCLEAR FUSION DEFECTIVE 1)O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.498.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
5.797.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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