Co-expression analysis

Gene ID	Zm.2752.1.A1_at
Gene name	hypothetical protein LOC100274105
Homology with Arabidopsis	Similar to At5g09980: PROPEP4 (Elicitor peptide 4 precursor) (HF=1e+0)
Module size	9 genes
NF	0.81
%ile	97.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	75.1	0.73	Zm.2752.1.A1_at	CA404590	hypothetical protein LOC100274105	-	1e+0	At5g09980	PROPEP4 (Elicitor peptide 4 precursor)	O.I.	H.G.	S.X.	Please select
0.88	96.7	0.83	Zm.3390.1.A1_at	CB816151	hypothetical protein LOC100272309	-	2e-10	At5g42990	UBC18 (ubiquitin-conjugating enzyme 18)	O.I.	H.G.	S.X.	Please select
0.88	96.7	0.89	Zm.14516.1.S1_at	CA404692	transcription initiation factor TFIID subunit 10	-	3e-2	At4g31720	TAFII15 (TBP-ASSOCIATED FACTOR II 15)	O.I.	H.G.	S.X.	Please select
0.82	94.6	0.83	ZmAffx.1280.1.S1_s_at	11990232-68	-	-	7e-132	Atcg01280	-	O.I.	H.G.	S.X.	Please select
0.82	94.6	0.86	Zm.14303.1.S1_at	AY232824.1	VEF family protein	-	3e-26	At5g51230	EMF2 (EMBRYONIC FLOWER 2)	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.83	Zm.16322.1.A1_at	BG873909	hypothetical protein LOC100280029	-	2e+0	At5g62330	-	O.I.	H.G.	S.X.	Please select
0.75	90.8	0.86	Zm.8001.1.A1_at	CF632719	HGA4	-	3e+0	At3g54900	CXIP1 (CAX INTERACTING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.74	90.3	0.81	Zm.14534.1.A1_at	CB278150	-	-	2e+0	At3g08940	LHCB4.2 (light harvesting complex PSII)	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.87	Zm.10223.1.S1_at	BM078528	elongin C	-	7e+0	At4g19870	kelch repeat-containing F-box family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	96.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.6	96.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.1	94.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.5	92.6	GSM253244	ZM_12h_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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