Co-expression analysis

Gene ID Zm.2707.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g05340: peroxidase, putative (HF=2e-1)
Module size 6 genes
NF 0.07
%ile 3.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.93Zm.2707.1.S1_atBG842199--2e-1At5g05340peroxidase, putativeO.I.H.G.S.X.
0.2216.90.97Zm.13315.1.S1_atCA827618pairing protein meu13-like-9e-15At1g13330-O.I.H.G.S.X.
0.062.30.97Zm.15605.1.S1_atCA402349isopenicillin N epimerase-2e-2At3g62130epimerase-relatedO.I.H.G.S.X.
0.051.90.96Zm.17740.1.A1_atCK370696hypothetical protein LOC100277215-6e+0At3g29797-O.I.H.G.S.X.
0.031.10.97Zm.10375.1.S1_atBQ703821--2e-17At2g35360ubiquitin family proteinO.I.H.G.S.X.
0.031.10.97ZmAffx.988.1.S1_atAI834703--3e+0At5g50562unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.898.1GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320446protocol: mRNA - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.211356.1.S1_at, orthologous to the query gene, Zm.2707.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8997.8PtpAffx.211356.1.S1_atAt5g05340hypothetical protein-1e-4At1g14540anionic peroxidase, putativeO.I.H.G.S.X.
0.7192.6PtpAffx.222980.1.S1_atAt5g05340hypothetical protein-2e-1At4g04404zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.4875.4PtpAffx.204851.1.S1_atAt5g05340hypothetical protein-1e-5At1g30370lipase class 3 family proteinO.I.H.G.S.X.
0.4369.7PtpAffx.225543.1.S1_s_atAt5g05340hypothetical protein-8e-9At1g14550anionic peroxidase, putativeO.I.H.G.S.X.
0.4268.6PtpAffx.204654.1.S1_atAt5g05340hypothetical protein-4e+0At4g02360unknown proteinO.I.H.G.S.X.
0.3863.7PtpAffx.205330.1.S1_s_atAt5g05340hypothetical protein-9e-2At4g37150MES9 (METHYL ESTERASE 9)O.I.H.G.S.X.
0.3357.5PtpAffx.149273.1.S1_atAt5g05340hypothetical protein-1e+0At2g02850ARPN (PLANTACYANIN)O.I.H.G.S.X.
0.3052.0PtpAffx.218018.1.S1_atAt5g05340flavonoid o-methyltransferase related-6e-4At3g1678060S ribosomal protein L19 (RPL19B)O.I.H.G.S.X.
0.2340.5PtpAffx.202418.1.S1_atAt5g05340multidrug/pheromone exporter, MDR family, ABC transporter family-3e-24At3g62150PGP21 (P-GLYCOPROTEIN 21)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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