| Gene ID | Zm.2707.1.S1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g05340: peroxidase, putative (HF=2e-1) |
| Module size | 6 genes |
| NF | 0.07 |
| %ile | 3.5 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.93 | Zm.2707.1.S1_at | BG842199 | - | - | 2e-1 | At5g05340 | peroxidase, putative | O.I. | H.G. | S.X. | |
| 0.22 | 16.9 | 0.97 | Zm.13315.1.S1_at | CA827618 | pairing protein meu13-like | - | 9e-15 | At1g13330 | - | O.I. | H.G. | S.X. | |
| 0.06 | 2.3 | 0.97 | Zm.15605.1.S1_at | CA402349 | isopenicillin N epimerase | - | 2e-2 | At3g62130 | epimerase-related | O.I. | H.G. | S.X. | |
| 0.05 | 1.9 | 0.96 | Zm.17740.1.A1_at | CK370696 | hypothetical protein LOC100277215 | - | 6e+0 | At3g29797 | - | O.I. | H.G. | S.X. | |
| 0.03 | 1.1 | 0.97 | Zm.10375.1.S1_at | BQ703821 | - | - | 2e-17 | At2g35360 | ubiquitin family protein | O.I. | H.G. | S.X. | |
| 0.03 | 1.1 | 0.97 | ZmAffx.988.1.S1_at | AI834703 | - | - | 3e+0 | At5g50562 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 8.8 | 98.1 | GSM320445 | protocol: mRNA - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.3 | 97.8 | GSM320446 | protocol: mRNA - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.3 | 96.9 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.1 | 96.8 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.9 | 96.7 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.7 | 96.5 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.6 | 95.2 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.6 | 95.2 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.5 | 95.1 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.9 | 93.8 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.93 | 99.2 | Os07g0677100 | At5g05340 | - | Peroxidase | 2e-4 | At5g05340 | peroxidase, putative | O.I. | H.G. | S.X. | |
| 0.22 | 19.4 | Os12g0520200 | At5g05340 | - | Phenylalanine ammonia-lyase (EC 4.3.1.5)(Fragment) | 2e-5 | At3g53260 | PAL2 | O.I. | H.G. | S.X. | |
| 0.03 | 1.4 | Os10g0415800 | At5g05340 | - | Acylamino acid-releasing enzyme | 4e-4 | At4g14570 | acylaminoacyl-peptidase-related | O.I. | H.G. | S.X. | |
| 0.02 | 1.0 | Os01g0855200 | At5g05340 | - | TPR-like domain containing protein | 8e-2 | At5g56840 | DNA-binding family protein | O.I. | H.G. | S.X. | |
| 0.02 | 1.0 | Os03g0323200 | At5g05340 | - | CobN/magnesium chelatase family protein | 2e-56 | At5g13630 | GUN5 (GENOMES UNCOUPLED 5) | O.I. | H.G. | S.X. | |
| 0.02 | 1.0 | Os05g0291700 | At5g05340 | - | Conserved hypothetical protein | 7e-1 | At1g79810 | TED3 (REVERSAL OF THE DET PHENOTYPE 3) | O.I. | H.G. | S.X. | |
| 0.02 | 1.0 | Os03g0138700 | At5g05340 | - | TGF-beta receptor, type I/II extracellular regionfamily protein | 7e-2 | At5g46050 | PTR3 (PEPTIDE TRANSPORTER 3) | O.I. | H.G. | S.X. | |
| 0.01 | 0.5 | Os07g0677200 | At5g05340 | - | Peroxidase | 3e-6 | At5g05340 | peroxidase, putative | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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