Co-expression analysis

Gene ID Zm.2702.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g12970: C2 domain-containing protein (HF=7e-5)
Module size 12 genes
NF 0.42
%ile 49.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8896.70.95Zm.2702.1.A1_atAY107337.1--7e-5At5g12970C2 domain-containing proteinO.I.H.G.S.X.
0.5571.60.98Zm.5910.1.S1_atAB018590.1GR2b protein-2e+0At4g31660transcriptional factor B3 family proteinO.I.H.G.S.X.
0.4861.30.98Zm.6296.1.A1_atCF602635--5e-1At2g46870NGA1 (NGATHA1)O.I.H.G.S.X.
0.4759.90.98Zm.14501.4.A1_atCK849957Hypothetical protein LOC100191411-3e-46At5g22060ATJ2O.I.H.G.S.X.
0.4759.90.97Zm.17643.1.S1_atCK368600--2e-1At5g54850unknown proteinO.I.H.G.S.X.
0.4251.30.98Zm.16524.8.A1_atAI665572--3e-3At1g02405proline-rich family proteinO.I.H.G.S.X.
0.3945.60.98Zm.10299.1.S1_atAW172106--7e-1At4g15910ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21)O.I.H.G.S.X.
0.3641.30.98RPTR-Zm-M10961-4_atRPTR-Zm-M10961-4---O.I.H.G.S.X.
0.3538.90.98Zm.14501.3.A1_atAY107741.1NAC domain-containing protein 68-2e-15At3g44110ATJ3O.I.H.G.S.X.
0.2928.10.99Zm.9958.1.A1_atBM333322--6e-2At3g01320SNL1 (SIN3-LIKE 1)O.I.H.G.S.X.
0.2419.80.97Zm.8636.1.A1_atBM075018--2e+1At5g55507hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2318.60.98Zm.16537.1.S1_atAY103617.140S ribosomal protein SA-4e-70At1g72370P40O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.498.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.793.2GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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