Co-expression analysis

Gene ID Zm.2688.2.A1_a_at
Gene name hypothetical protein LOC100273855
Homology with ArabidopsisSimilar to At3g25120: mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (HF=5e+0)
Module size 9 genes
NF 0.58
%ile 77.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5775.10.98Zm.2688.2.A1_a_atCK986048hypothetical protein LOC100273855-5e+0At3g25120mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinO.I.H.G.S.X.
0.8996.80.98Zm.9335.1.A1_atBM268136hypothetical protein LOC100273605-2e-2At2g40580protein kinase family proteinO.I.H.G.S.X.
0.6785.80.99ZmAffx.1199.1.S1_atBE057023--5e-2At3g48610phosphoesterase family proteinO.I.H.G.S.X.
0.6785.80.99Zm.6751.1.A1_atBG873976hypothetical protein LOC100274772-4e-5At3g62580-O.I.H.G.S.X.
0.6077.80.99Zm.10557.1.A1_a_atCK347884hypothetical protein LOC100280344 /// agmatine deiminase-6e-6At5g08170EMB1873 (EMBRYO DEFECTIVE 1873)O.I.H.G.S.X.
0.5976.10.99ZmAffx.932.1.A1_atAI795506--3e+0At5g22430unknown proteinO.I.H.G.S.X.
0.5571.60.99Zm.8149.2.A1_atBM072723--6e+0At4g14640CAM8 (CALMODULIN 8)O.I.H.G.S.X.
0.3844.20.99Zm.8734.1.A1_atCA403611hypothetical protein LOC100275773-3e-16At2g42230tubulin-specific chaperone C-relatedO.I.H.G.S.X.
0.3336.00.99Zm.17775.1.S1_atCF62760250S ribosomal protein L12-2-5e+0At4g14358-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.198.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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