Co-expression analysis

Gene ID	Zm.2671.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g26150: PERK10 (PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10) (HF=3e+0)
Module size	17 genes
NF	0.25
%ile	20.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.97	99.9	0.95	Zm.2671.1.S1_at	AW066803	-	-	3e+0	At1g26150	PERK10 (PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10)	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.99	Zm.14476.1.A1_a_at	AY105708.1	protein disulfide isomerase /// protein disulfide isomerase	-	1e-3	At5g60640	ATPDIL1-4 (PDI-LIKE 1-4)	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.98	Zm.1449.2.S1_a_at	BM382632	early drought induced protein	-	3e-1	At1g45248	-	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.97	Zm.3277.1.A1_at	CO520691	hypothetical protein LOC100193700	-	2e-8	At1g75220	integral membrane protein, putative	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.99	Zm.6608.1.A1_at	CF015737	-	-	7e+0	At5g60510	undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.99	Zm.10656.1.A1_at	BQ538423	hypothetical protein LOC100216802	-	3e+0	At4g25570	ACYB-2	O.I.	H.G.	S.X.	Please select
0.28	28.1	0.99	Zm.661.2.A1_at	AF290415.1	chloroplast RNA splicing1	-	6e-2	At3g18390	EMB1865 (embryo defective 1865)	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.99	Zm.7121.2.S1_at	AF457960.1	-	-	5e-6	At3g12120	FAD2 (FATTY ACID DESATURASE 2)	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.99	Zm.2946.1.S1_at	CF384431	-	-	1e+0	At5g41450	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.99	Zm.6614.1.A1_at	CO533019	coronatine-insensitive protein 1	-	1e+0	At2g26030	F-box family protein	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.99	Zm.7051.1.S1_at	AI833408	hypothetical protein LOC100277200	-	1e+0	At5g61997	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.98	Zm.17028.1.S1_at	CF972440	-	-	3e-1	At1g70540	EDA24 (embryo sac development arrest 24)	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.97	Zm.250.1.S1_at	CF007330	basal layer antifungal protein2 /// hypothetical protein LOC100193396 /// hypothetical protein LOC100279097	-	5e+0	At3g06000	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.98	Zm.7117.1.A1_at	AY104703.1	-	-	5e+0	At5g28630	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.98	Zm.1703.1.S1_at	CO522762	M27 protein	-	6e-9	At2g45650	AGL6 (AGAMOUS-LIKE 6)	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.98	Zm.14505.1.S1_at	CF627848	hypothetical protein LOC100193904 /// UDP-glucose 4-epimerase GEPI48	-	1e-15	At4g10960	UGE5 (UDP-D-glucose/UDP-D-galactose 4-epimerase 5)	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.97	Zm.5450.1.A1_at	CO521828	hypothetical protein LOC100216592	-	1e-1	At1g08080	ACA7 (ALPHA CARBONIC ANHYDRASE 7)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.4	98.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.6	98.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.3	91.7	GSM320463	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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