Co-expression analysis

Gene ID	Zm.2613.1.A1_at
Gene name	sucrose-phosphatase1
Homology with Arabidopsis	Similar to At2g35840: sucrose-phosphatase 1 (SPP1) (HF=4e-15)
Module size	6 genes
NF	0.13
%ile	8.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	69.1	0.89	Zm.2613.1.A1_at	AF283564.2	sucrose-phosphatase1	-	4e-15	At2g35840	sucrose-phosphatase 1 (SPP1)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.88	Zm.16829.2.S1_at	AY105706.1	hypothetical protein LOC100277102	-	5e-4	At4g33985	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.89	Zm.1338.1.A1_at	AY107813.1	-	-	6e+0	At5g15350	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.89	Zm.2654.2.S1_a_at	CF040564	ubiquilin-1	-	5e-12	At2g17200	ubiquitin family protein	O.I.	H.G.	S.X.	Please select
0.10	4.6	0.89	Zm.4.2.A1_at	CA401225	-	-	2e-3	At5g11860	NLI interacting factor (NIF) family protein	O.I.	H.G.	S.X.	Please select
0.03	1.1	0.88	Zm.14903.1.A1_at	CF634216	Asparagine synthetase 4	-	1e-4	At3g47340	ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.6	97.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM320439	protocol: mRNA - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM320438	protocol: mRNA - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.9	96.7	GSM320440	protocol: mRNA - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.5	96.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8	95.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.3	94.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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