Co-expression analysis

Gene ID Zm.26.1.A1_at
Gene name sucrose phosphate synthase1
Homology with ArabidopsisSimilar to At1g04920: ATSPS3F (sucrose phosphate synthase 3F) (HF=1e-19)
Module size 11 genes
NF 0.23
%ile 17.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.88Zm.26.1.A1_atM97550.1sucrose phosphate synthase1-1e-19At1g04920ATSPS3F (sucrose phosphate synthase 3F)O.I.H.G.S.X.
0.5571.60.93Zm.7605.1.S1_atAY106015.130S ribosomal protein S17-4e-11At1g49400emb1129 (embryo defective 1129)O.I.H.G.S.X.
0.4251.30.93Zm.4904.1.S1_atAI621949arsenical pump-driving ATPase-3e-15At3g10350anion-transporting ATPase family proteinO.I.H.G.S.X.
0.3336.00.93Zm.13863.1.A1_atU69129.1isocitrate lyase-4e-9At3g21720ICL (ISOCITRATE LYASE)O.I.H.G.S.X.
0.3233.40.92Zm.6768.1.S1_atAI396277anther-specific proline-rich protein APG-2e-4At1g29670GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.2724.60.93Zm.10239.1.S1_atAF461813.1chromatin complex subunit A101-5e-25At5g66750CHR1 (CHROMATIN REMODELING 1)O.I.H.G.S.X.
0.2521.30.93Zm.18128.1.S1_atCN845258Grx_I1 - glutaredoxin subgroup III-4e+0At5g53490thylakoid lumenal 17.4 kDa protein, chloroplastO.I.H.G.S.X.
0.2318.60.92Zm.3254.2.S1_atCA403402--7e-11At1g18450ATARP4O.I.H.G.S.X.
0.2216.90.95Zm.5851.11.A1_x_atCO527835hypothetical protein LOC100217054-3e-16At4g37550formamidase, putative / formamide amidohydrolase, putativeO.I.H.G.S.X.
0.147.70.93Zm.8955.1.A1_atAY110626.1ubiquitin-protein ligase/ zinc ion binding protein-4e-2At3g60300RWD domain-containing proteinO.I.H.G.S.X.
0.072.90.92Zm.2702.2.S1_atCA405056hypothetical protein LOC100276342-3e+0At5g24660LSU2 (RESPONSE TO LOW SULFUR 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.498.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320444protocol: mRNA - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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