Co-expression analysis

Gene ID Zm.2514.1.A1_at
Gene name hypothetical protein LOC100273294
Homology with ArabidopsisSimilar to At4g21450: vesicle-associated membrane family protein / VAMP family protein (HF=1e-8)
Module size 6 genes
NF 0.46
%ile 56.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6179.50.82Zm.2514.1.A1_atCO524312hypothetical protein LOC100273294-1e-8At4g21450vesicle-associated membrane family protein / VAMP family proteinO.I.H.G.S.X.
0.5976.10.81Zm.607.1.A1_atAF326495.1plasma membrane integral protein ZmPIP2-6-2e-25At2g37170PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)O.I.H.G.S.X.
0.5571.60.86Zm.15439.1.A1_atCD219438--3e-3At2g31820ankyrin repeat family proteinO.I.H.G.S.X.
0.5065.70.87Zm.2000.1.A1_atAY110879.1--4e+0At1g73885unknown proteinO.I.H.G.S.X.
0.5065.70.90Zm.12050.1.A1_atBM416823early flowering 4-1e+0At5g16030unknown proteinO.I.H.G.S.X.
0.1912.80.84Zm.15298.1.A1_atBQ538208--1e+0At5g63740zinc finger protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.897.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM205367Mo17xB73 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
4.596.3GSM205365Mo17 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
4.296.0GSM320446protocol: mRNA - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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