Co-expression analysis

Gene ID	Zm.2361.1.A1_at
Gene name	hypothetical protein LOC100191552
Homology with Arabidopsis	Similar to At1g53540: 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) (HF=3e-17)
Module size	17 genes
NF	0.30
%ile	28.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.94	Zm.2361.1.A1_at	BM381388	hypothetical protein LOC100191552	-	3e-17	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	O.I.	H.G.	S.X.	Please select
0.51	66.4	0.95	Zm.7343.1.S1_at	AF371278.1	alpha globulin	-	6e-1	At5g05230	ubiquitin-protein ligase	O.I.	H.G.	S.X.	Please select
0.45	56.4	0.96	Zm.17549.2.A1_at	AW267524	hypothetical protein LOC100272329	-	3e-1	At5g14160	F-box family protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.95	Zm.18669.1.A1_at	CO521992	hypothetical protein LOC100273322	-	3e-4	At5g50840	-	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.96	Zm.17765.1.S1_at	CK371533	-	-	1e+0	At2g25280	-	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.95	Zm.4768.1.A1_at	AY107116.1	hypothetical protein LOC100192636	-	5e-30	At1g64550	ATGCN3	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.97	Zm.9403.1.A1_at	CK371107	ras-related protein Rab11B	-	3e-43	At3g15060	AtRABA1g (Arabidopsis Rab GTPase homolog A1g)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.97	Zm.10133.1.A1_at	CD441295	ruBisCO large subunit-binding protein subunit beta	-	2e-60	At1g55490	CPN60B (CHAPERONIN 60 BETA)	O.I.	H.G.	S.X.	Please select
0.28	28.1	0.96	Zm.4800.1.A1_at	CF628838	glucose-6-phosphate isomerase	-	1e-40	At4g24620	PGI1 (PHOSPHOGLUCOSE ISOMERASE 1)	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.96	Zm.961.1.A1_at	CA400684	LAP4 protein	-	2e+0	At2g02370	-	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.95	Zm.8827.1.A1_at	BM349349	hypothetical protein LOC100273901	-	2e+0	At4g08485	-	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.96	Zm.1417.3.A1_a_at	CF010509	-	-	8e-2	At4g34960	peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative	O.I.	H.G.	S.X.	Please select
0.20	14.2	0.96	Zm.4271.5.A1_x_at	AI881217	hypothetical protein LOC100191665	-	2e+1	At3g55470	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.20	14.2	0.97	Zm.17933.1.A1_at	CF629311	hypothetical protein LOC100193370	-	2e+0	At4g27670	HSP21 (HEAT SHOCK PROTEIN 21)	O.I.	H.G.	S.X.	Please select
0.20	14.2	0.96	Zm.14536.1.A1_at	AY187719.1	SET domain protein SDG117	-	5e-1	At1g55260	lipid binding	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.96	Zm.3892.3.A1_at	AF136829.1	elongation factor 1 alpha	-	0	At1g07920	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.96	Zm.2134.1.A1_at	AI734434	-	-	9e-2	At2g41780	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.1	98.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.4	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.2	98.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.1	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.7	98.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM202319	Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
7.3	97.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.3	96.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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