Co-expression analysis

Gene ID	Zm.2347.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g72300: leucine-rich repeat transmembrane protein kinase, putative (HF=3e-11)
Module size	7 genes
NF	0.52
%ile	67.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	94.0	0.97	Zm.2347.1.S1_at	AW424529	-	-	3e-11	At1g72300	leucine-rich repeat transmembrane protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.6212.1.A1_at	AI677302	-	-	8e-1	At4g19270	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.96	Zm.14541.1.S1_a_at	AY107924.1	agmatine coumaroyltransferase	-	2e+1	At5g18403	-	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.614.1.A1_at	CK368072	tonoplast membrane integral protein ZmTIP2-2	-	2e-19	At3g16240	DELTA-TIP	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.14540.1.A1_at	AY108502.1	RNA-binding region RNP-1	-	2e+0	At3g29034	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.3747.1.S1_at	BM267525	-	-	3e-1	At2g42930	glycosyl hydrolase family protein 17	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.97	Zm.5954.1.A1_at	AF464905.1	repressor protein	-	1e-11	At3g12480	NF-YC11 (NUCLEAR FACTOR Y, SUBUNIT C11)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.2	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.0	98.2	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
8.8	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.2	97.8	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
7.2	97.8	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
6.8	97.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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