| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
| 0.55 | 71.6 | 0.94 | Zm.2298.2.A1_a_at | BQ619139 | hypothetical protein LOC100192687 | - | 1e-21 | At3g14420 | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.95 | Zm.4905.1.S1_at | AY106392.1 | hypothetical protein LOC100272547 | - | 1e-14 | At4g27120 | unknown protein | O.I. | H.G. | S.X. | |
| 0.47 | 59.9 | 0.94 | Zm.2525.1.A1_at | BM380204 | germin-like protein subfamily 1 member 11 | - | 3e-2 | At1g02335 | GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.) | O.I. | H.G. | S.X. | |
| 0.37 | 42.3 | 0.95 | Zm.537.1.A1_a_at | AI065500 | hypothetical protein LOC100194026 /// hypothetical protein LOC100273405 | - | 1e-55 | At4g02930 | elongation factor Tu, putative / EF-Tu, putative | O.I. | H.G. | S.X. | |
| 0.35 | 38.9 | 0.97 | Zm.6848.3.S1_at | AW562823 | - | - | 5e-12 | At1g09640 | elongation factor 1B-gamma, putative / eEF-1B gamma, putative | O.I. | H.G. | S.X. | |
| 0.35 | 38.9 | 0.96 | Zm.5566.1.A1_a_at | AI461543 | hypothetical protein LOC100193873 /// mitochondrial ATP synthase | - | 5e-1 | At1g67090 | RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) | O.I. | H.G. | S.X. | |
| 0.27 | 24.6 | 0.96 | Zm.17224.1.S1_s_at | BM500725 | - | - | 2e-11 | At3g55870 | anthranilate synthase, alpha subunit, putative | O.I. | H.G. | S.X. | |
| 0.27 | 24.6 | 0.96 | Zm.2859.1.A1_a_at | BM351067 | alcohol dehydrogenase2 | - | 2e-11 | At1g77120 | ADH1 (ALCOHOL DEHYDROGENASE 1) | O.I. | H.G. | S.X. | |
| 0.22 | 16.9 | 0.96 | Zm.3136.1.A1_at | CF625170 | hypothetical protein LOC100192461 | - | 9e-66 | At4g13930 | SHM4 (serine hydroxymethyltransferase 4) | O.I. | H.G. | S.X. | |
| 0.19 | 12.8 | 0.95 | Zm.15183.1.A1_at | BM334953 | - | - | 1e+0 | At2g25770 | unknown protein | O.I. | H.G. | S.X. | |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 6.8 | 97.6 | GSM253280 | ZM_8d_SG200_3Alu_I | GSE10023 | Maize gene expression during infection with Ustilago maydis |  |
| 6.2 | 97.4 | GSM253282 | ZM_8d_SG200_3Alu_III | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 5.9 | 97.3 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.9 | 97.3 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.8 | 97.2 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.6 | 97.1 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.4 | 97.0 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.3 | 96.9 | GSM253281 | ZM_8d_SG200_3Alu_II | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 5.0 | 96.7 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.0 | 96.7 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
