Co-expression analysis

Gene ID Zm.2263.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g43050: ATPMEPCRD (HF=7e-5)
Module size 6 genes
NF 0.55
%ile 73.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.96Zm.2263.1.A1_atAW330859--7e-5At2g43050ATPMEPCRDO.I.H.G.S.X.
0.6785.80.97Zm.13797.2.A1_atAY105820.1hypothetical protein LOC100279789-8e-4At3g20770EIN3 (ETHYLENE-INSENSITIVE3)O.I.H.G.S.X.
0.6179.50.95Zm.1404.1.A1_atAY108922.1sugar transport protein 5-7e+0At2g37585glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinO.I.H.G.S.X.
0.5065.70.97Zm.12848.1.A1_atAW037142hypothetical protein LOC100273763-5e-1At1g18780zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4455.70.96Zm.2925.3.A1_atCF002413Ubiquitin-4e-41At2g47110UBQ6O.I.H.G.S.X.
0.1912.80.96Zm.17843.2.A1_atCD999046hypothetical protein LOC100216964-6e-1At2g47910CRR6 (chlororespiratory reduction 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.099.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.298.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.898.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.598.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.598.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320469protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.217886.1.S1_at, orthologous to the query gene, Zm.2263.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5683.9PtpAffx.217886.1.S1_atAt2g43050hypothetical protein-1e-2At4g13420HAK5 (HIGH AFFINITY K+ TRANSPORTER 5)O.I.H.G.S.X.
0.1932.7PtpAffx.213596.1.S1_atAt2g43050hypothetical protein-3e+0At5g3767015.7 kDa class I-related small heat shock protein-like (HSP15.7-CI)O.I.H.G.S.X.
0.1626.9PtpAffx.218975.1.S1_atAt2g43050hypothetical protein-7e+0At5g2244060S ribosomal protein L10A (RPL10aC)O.I.H.G.S.X.
0.1118.1PtpAffx.82456.1.A1_atAt2g43050--1e+0At4g20440smB (small nuclear ribonucleoprotein associated protein B)O.I.H.G.S.X.
0.0914.6PtpAffx.200572.1.S1_atAt2g43050hypothetical protein-2e-1At5g07310AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.069.8PtpAffx.160443.2.A1_atAt2g43050hypothetical protein-1e+0At1g74560NRP1 (NAP1-RELATED PROTEIN 1)O.I.H.G.S.X.
0.058.3PtpAffx.223086.1.S1_atAt2g43050hypothetical protein-2e+0At3g50800unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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