Co-expression analysis

Gene ID	Zm.2167.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g16780: DOT2 (DEFECTIVELY ORGANIZED TRIBUTARIES 2) (HF=9e-1)
Module size	7 genes
NF	0.38
%ile	41.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.2	0.89	Zm.2167.1.A1_at	AI714599	-	-	9e-1	At5g16780	DOT2 (DEFECTIVELY ORGANIZED TRIBUTARIES 2)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.87	Zm.4730.1.A1_at	BM078833	hypothetical protein LOC100194390	-	6e-4	At4g25570	ACYB-2	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.91	Zm.5261.1.A1_at	CF041434	hypothetical protein LOC100273065	-	2e-37	At2g41540	GPDHC1	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.91	Zm.10200.1.A1_at	BM379455	hypothetical protein LOC100274487	-	4e-6	At4g30020	subtilase family protein	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.91	Zm.11983.1.A1_at	BM382368	-	-	2e-1	At4g16240	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.90	Zm.16750.1.A1_at	CA401312	hypothetical protein LOC100191935	-	5e-1	At1g04445	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.88	Zm.277.1.A1_at	BM334978	hypothetical protein LOC100272982	-	1e+0	At1g11210	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.5	97.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.6	96.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.8	93.5	GSM253257	ZM_2d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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