Co-expression analysis

Gene ID	Zm.2157.7.S1_at
Gene name	ribosomal protein S11
Homology with Arabidopsis	Similar to At4g30800: 40S ribosomal protein S11 (RPS11B) (HF=1e-38)
Module size	6 genes
NF	0.53
%ile	69.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.98	Zm.2157.7.S1_at	CF019402	ribosomal protein S11	-	1e-38	At4g30800	40S ribosomal protein S11 (RPS11B)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.2157.8.S1_at	BI096578	Hypothetical protein LOC100193584	-	8e-1	At3g66654	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.98	Zm.3657.1.A1_s_at	BG874068	-	-	1e+0	At5g42635	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.12150.2.S1_at	AI619383	hypothetical protein LOC100273319	-	9e-1	At4g31340	myosin heavy chain-related	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.98	Zm.10174.1.A1_at	AY111125.1	-	-	4e+0	At2g47370	-	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.98	Zm.6916.1.S1_at	AW067358	hypothetical protein LOC100273981	-	9e-13	At5g66750	CHR1 (CHROMATIN REMODELING 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.8	97.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.5	97.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.2	96.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.0	95.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
1.7	88.2	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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