Co-expression analysis

Gene ID Zm.2140.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g14455: ATBET12 (HF=6e-1)
Module size 18 genes
NF 0.59
%ile 78.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7892.50.99Zm.2140.1.S1_atAW453259--6e-1At4g14455ATBET12O.I.H.G.S.X.
0.7691.10.99Zm.661.2.A1_atAF290415.1chloroplast RNA splicing1-6e-2At3g18390EMB1865 (embryo defective 1865)O.I.H.G.S.X.
0.7490.30.99Zm.16709.1.A1_atCN844137--2e+0At4g21560VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1)O.I.H.G.S.X.
0.7288.60.99Zm.3457.1.A1_atAW171820hypothetical protein LOC100193080-2e-19At3g21640TWD1 (TWISTED DWARF 1)O.I.H.G.S.X.
0.7188.20.99Zm.6885.1.S1_atAY106322.1cell division control protein 50-6e-1At3g12740ALIS1 (ALA-INTERACTING SUBUNIT 1)O.I.H.G.S.X.
0.6582.10.99Zm.6614.1.A1_atCO533019coronatine-insensitive protein 1-1e+0At2g26030F-box family proteinO.I.H.G.S.X.
0.6582.10.99Zm.7127.1.A1_atBM266653nonspecific lipid-transfer protein-8e+0At5g53300UBC10 (ubiquitin-conjugating enzyme 10)O.I.H.G.S.X.
0.6582.10.99Zm.7121.2.S1_atAF457960.1--5e-6At3g12120FAD2 (FATTY ACID DESATURASE 2)O.I.H.G.S.X.
0.6381.10.99Zm.6079.1.S1_atBM268227ribosomal protein L25-1e-53At2g39460RPL23AA (RIBOSOMAL PROTEIN L23AA)O.I.H.G.S.X.
0.5775.10.99Zm.14137.2.S1_atCA402353hypothetical protein LOC100193311-2e-35At1g77130PGSIP2 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 2)O.I.H.G.S.X.
0.5674.40.99Zm.7119.1.S1_atBI180129--3e-1At1g69600ZFHD1 (ZINC FINGER HOMEODOMAIN 1)O.I.H.G.S.X.
0.5674.40.99Zm.625.1.S1_atBG841424MAP kinase phosphatase-1e-1At1g44020DC1 domain-containing proteinO.I.H.G.S.X.
0.5065.70.99Zm.15932.1.A1_atAJ577238.1beta3-glucuronyltransferase-8e-1At5g28610-O.I.H.G.S.X.
0.4658.40.99Zm.14497.8.A1_s_atCO52746960S ribosomal protein L27 /// 60S ribosomal protein L27-2e-6At3g2223060S ribosomal protein L27 (RPL27B)O.I.H.G.S.X.
0.4556.40.99Zm.1269.1.A1_atBM350862--5e+0At5g53980ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52)O.I.H.G.S.X.
0.4149.70.99Zm.5082.1.S1_atAY107877.1nucleoside diphosphate kinase 4-6e-29At4g11010NDPK3 (NUCLEOSIDE DIPHOSPHATE KINASE 3)O.I.H.G.S.X.
0.4048.50.99Zm.5833.1.A1_atCA398697adenylate kinase-1e-2At5g47840AMK2 (Adenosine monophosphate kinase)O.I.H.G.S.X.
0.3844.20.99Zm.4061.1.S1_atAI834355--3e+0At3g25030zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.898.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.190.8GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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