Co-expression analysis

Gene ID Zm.2031.1.A1_at
Gene name csu1120 protein
Homology with ArabidopsisSimilar to At3g50550: unknown protein (HF=5e-4)
Module size 6 genes
NF 0.43
%ile 50.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.98Zm.2031.1.A1_atAY103664.1csu1120 protein-5e-4At3g50550unknown proteinO.I.H.G.S.X.
0.5065.70.98Zm.19094.1.S1_atCO522607hypothetical protein LOC100279575-2e-4At1g14540anionic peroxidase, putativeO.I.H.G.S.X.
0.4352.80.98Zm.1706.1.A1_atBF728433hypothetical protein LOC100276850-1e+0At5g47870unknown proteinO.I.H.G.S.X.
0.3844.20.98Zm.13794.1.S1_atAY104961.1--7e-1At5g53280PDV1 (PLASTID DIVISION1)O.I.H.G.S.X.
0.3641.30.97Zm.5715.1.A2_atBI542710O-methyltransferase ZRP4-3e+0At5g25752RBL11 (RHOMBOID-LIKE PROTEIN 11)O.I.H.G.S.X.
0.1811.60.98Zm.2966.1.S1_atAI001347hypothetical protein LOC100273775-8e-1At1g01810unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.499.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.798.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.696.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM202304B73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os01g0974200, orthologous to the query gene, Zm.2031.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.99100.0Os01g0974200At3g50550-RicMT (Metallothionein-like protein)2e-2At3g09390MT2A (METALLOTHIONEIN 2A)O.I.H.G.S.X.
0.4762.3Os04g0559700At3g50550-HvPIP1;5 protein2e-35At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)O.I.H.G.S.X.
0.4152.4Os04g0533300At3g50550-Remorin (pp34)5e-4At5g23750remorin family proteinO.I.H.G.S.X.
0.3948.3Os02g0666200At3g50550-Aquaporin3e-18At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)O.I.H.G.S.X.
0.3948.3Os05g0135700At3g50550-S-adenosylmethionine synthetase 1 (EC 2.5.1.6)(Methionine adenosyltransferase 1) (AdoMet synthetase 1)1e-8At1g02500SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1)O.I.H.G.S.X.
0.3846.9Os01g0784800At3g50550-Minor allergen4e-14At5g54500FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1)O.I.H.G.S.X.
0.3846.9Os11g0147800At3g50550-Wali7 protein (Fragment)4e-1At1g14620DECOY (DECOY)O.I.H.G.S.X.
0.3846.9Os04g0498600At3g50550-S- adenosylmethionine decarboxylase beta chain]2e-5At5g15948CPuORF10 (Conserved peptide upstream open reading frame 10)O.I.H.G.S.X.
0.3846.9Os03g0815200At3g50550-Methylenetetrahydrofolate reductase (EC 1.5.1.20)3e-44At2g44160MTHFR2 (METHYLENETETRAHYDROFOLATE REDUCTASE 2)O.I.H.G.S.X.
0.3846.9Os07g0694700At3g50550-Ascorbate peroxidase (EC 1.11.1.11)4e-25At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.3644.0Os01g0813400At3g50550-ADP-ribosylation factor2e-96At2g47170ARF1A1CO.I.H.G.S.X.
0.3541.7Os02g0760300At3g50550-Immunophilin2e-8At5g64350FKBP12 (FK506-BINDING PROTEIN)O.I.H.G.S.X.
0.3541.7Os01g0764000At3g50550-Glutathione S-transferase II1e-1At5g42680unknown proteinO.I.H.G.S.X.
0.3338.8Os04g0485300At3g50550-Glucose-6-phosphate dehydrogenase1e-36At3g27300G6PD5 (glucose-6-phosphate dehydrogenase 5)O.I.H.G.S.X.
0.3236.3Os11g0425600At3g50550-Four F5 protein family protein5e+0At5g42040RPN12b (Regulatory Particle Non-ATPase 12b)O.I.H.G.S.X.
0.3236.3Os03g0146100At3g50550-Tonoplast intrinsic protein (Tonoplast waterchannel)2e-28At3g26520TIP2 (TONOPLAST INTRINSIC PROTEIN 2)O.I.H.G.S.X.
0.3134.5Os06g0175500At3g50550-Epsin, N-terminal domain containing protein8e-11At5g35200epsin N-terminal homology (ENTH) domain-containing proteinO.I.H.G.S.X.
0.3032.7Os02g0121300At3g50550-Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)(PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-bindingprotein)9e-12At4g38740ROC1 (ROTAMASE CYP 1)O.I.H.G.S.X.
0.3032.7Os05g0402300At3g50550-Protein of unknown function UPF0005 family protein9e-3At4g15470-O.I.H.G.S.X.
0.2931.1Os06g0644200At3g50550-Vacuolar H+-pyrophosphatase (EC 3.6.1.1)9e-175At1g15690AVP1O.I.H.G.S.X.
0.2931.1Os01g0550300At3g50550-Conserved hypothetical protein2e-22At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)O.I.H.G.S.X.
0.2931.1Os12g0623900At3g50550-Ethylene-responsive methionine synthase (Fragment)0At5g17920ATMS1O.I.H.G.S.X.
0.2931.1Os01g0675100At3g50550-Peroxiredoxin4e-1At1g65970TPX2 (thioredoxin-dependent peroxidase 2)O.I.H.G.S.X.
0.2831.1Os02g0792900At3g50550-TMS membrane protein/tumour differentiallyexpressed protein family protein1e-15At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinO.I.H.G.S.X.
0.2625.6Os11g0167800At3g50550-Anth (Pollen-specific desiccation-associated LLA23protein)1e-1At1g62060unknown proteinO.I.H.G.S.X.
0.2625.6Os08g0191700At3g50550-Glyoxalase I family protein2e-13At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)O.I.H.G.S.X.
0.2524.1Os08g0126300At3g50550-Glyceraldehyde-3-phosphate dehydrogenase(Fragment)6e-23At1g13440GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)O.I.H.G.S.X.
0.2524.1Os07g0512200At3g50550-Symbiosis-related like protein2e-40At4g21980APG8A (AUTOPHAGY 8A)O.I.H.G.S.X.
0.2524.1Os09g0394900At3g50550-Annexin-like protein3e+0At5g23640unknown proteinO.I.H.G.S.X.
0.2422.4Os06g0152100At3g50550-Profilin 28e-15At2g19760PRF1 (PROFILIN 1)O.I.H.G.S.X.
0.2321.2Os07g0424400At3g50550-Cellulose synthase-71e-51At2g21770CESA9 (CELLULOSE SYNTHASE A9)O.I.H.G.S.X.
0.2219.4Os12g0624000At3g50550-Ethylene-responsive methionine synthase (Fragment)0At5g17920ATMS1O.I.H.G.S.X.
0.1813.7Os05g0489600At3g50550-NTGB1 (Fragment)1e-73At1g10630ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F)O.I.H.G.S.X.
0.1611.3Os07g0549700At3g50550-ARM repeat fold domain containing protein1e-12At3g42050vacuolar ATP synthase subunit H family proteinO.I.H.G.S.X.
0.138.2Os10g0478200At3g50550-Cytosolic malate dehydrogenase (EC 1.1.1.37)8e-44At5g43330malate dehydrogenase, cytosolic, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage