Co-expression analysis

Gene ID Zm.2031.1.A1_at
Gene name csu1120 protein
Homology with ArabidopsisSimilar to At3g50550: unknown protein (HF=5e-4)
Module size 6 genes
NF 0.43
%ile 50.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.98Zm.2031.1.A1_atAY103664.1csu1120 protein-5e-4At3g50550unknown proteinO.I.H.G.S.X.
0.5065.70.98Zm.19094.1.S1_atCO522607hypothetical protein LOC100279575-2e-4At1g14540anionic peroxidase, putativeO.I.H.G.S.X.
0.4352.80.98Zm.1706.1.A1_atBF728433hypothetical protein LOC100276850-1e+0At5g47870unknown proteinO.I.H.G.S.X.
0.3844.20.98Zm.13794.1.S1_atAY104961.1--7e-1At5g53280PDV1 (PLASTID DIVISION1)O.I.H.G.S.X.
0.3641.30.97Zm.5715.1.A2_atBI542710O-methyltransferase ZRP4-3e+0At5g25752RBL11 (RHOMBOID-LIKE PROTEIN 11)O.I.H.G.S.X.
0.1811.60.98Zm.2966.1.S1_atAI001347hypothetical protein LOC100273775-8e-1At1g01810unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.499.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.798.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.696.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM202304B73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At3g50550, orthologous to the query gene, Zm.2031.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
0.6176.7At3g50550824219unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPVAO.I.H.G.S.X.
0.8693.1At1g44810841045transcription regulatorF:transcription regulator activity;P:biological_process unknown;C:cellular_component unknown;MOFPBVO.I.H.G.S.X.
0.8089.8At2g22080816743unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:nucleus;MBOFPVAO.I.H.G.S.X.
0.6075.7At4g36920829845AP2 (APETALA 2)Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner.O.I.H.G.S.X.
0.4050.8At4g00270827164DNA-binding storekeeper protein-relatedF:transcription regulator activity;P:biological_process unknown;C:chloroplast;POMO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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