| Gene ID | Zm.2020.1.A1_at |
| Gene name | hypothetical protein LOC100274480 |
| Homology with Arabidopsis | Similar to At1g01470: LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) (HF=1e-4) |
| Module size | 6 genes |
| NF | 0.51 |
| %ile | 64.8 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 85.8 | 0.95 | Zm.2020.1.A1_at | AY105938.1 | hypothetical protein LOC100274480 | - | 1e-4 | At1g01470 | LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) | O.I. | H.G. | S.X. | |
| 0.57 | 75.1 | 0.96 | Zm.1779.1.A1_at | CF020941 | - | - | 1e+1 | At5g64020 | unknown protein | O.I. | H.G. | S.X. | |
| 0.57 | 75.1 | 0.97 | Zm.14760.1.A1_at | AY104289.1 | Ubiquitin-conjugating enzyme E2 | - | 2e+0 | At2g13980 | nucleic acid binding | O.I. | H.G. | S.X. | |
| 0.56 | 74.4 | 0.96 | Zm.16805.6.S1_x_at | BG320419 | ADP-ribosylation factor 1 | - | 2e-99 | At1g10630 | ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F) | O.I. | H.G. | S.X. | |
| 0.43 | 52.8 | 0.96 | Zm.15490.1.A1_at | CD448845 | subtilisin-chymotrypsin inhibitor CI-1B | - | 4e+0 | At5g38930 | germin-like protein, putative | O.I. | H.G. | S.X. | |
| 0.28 | 28.1 | 0.95 | Zm.15683.1.A1_at | CD440363 | - | - | 2e-2 | At1g27435 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 8.6 | 98.1 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.0 | 97.7 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.1 | 97.4 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.9 | 97.3 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.9 | 97.3 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.8 | 97.2 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.6 | 97.1 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.9 | 96.7 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.1 | 95.9 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.1 | 95.9 | GSM162267 | Mutant 1 with array type maize from Affymetrix | GSE7030 | Phenotypic and molecular characterisation of a novel Bt2 allele in maize | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.70 | 88.4 | Os05g0584200 | At1g01470 | - | Late embryogenesis abundant protein Lea14-A | 4e-2 | At1g01470 | LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | Os11g0703400 | At1g01470 | - | Snf7 family protein | 2e-19 | At2g06530 | VPS2.1 | O.I. | H.G. | S.X. | |
| 0.38 | 46.9 | Os01g0748900 | At1g01470 | - | Membrane attack complexcomponent/perforin/complement C9 family protein | 3e-4 | At1g29690 | CAD1 (constitutively activated cell death 1) | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | Os01g0261200 | At1g01470 | - | No apical meristem (NAM) protein domain containingprotein | 7e-5 | At3g10490 | anac052 (Arabidopsis NAC domain containing protein 52) | O.I. | H.G. | S.X. | |
| 0.35 | 41.7 | Os02g0699300 | At1g01470 | - | NTGB1 (Fragment) | 3e-32 | At3g03120 | ATARFB1C (ADP-ribosylation factor B1C) | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os04g0451900 | At1g01470 | - | Protein phosphatase 2C-like domain containingprotein | 6e-11 | At1g22280 | protein phosphatase 2C, putative / PP2C, putative | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os02g0173800 | At1g01470 | - | Eukaryotic protein of unknown function DUF284family protein | 2e-8 | At1g16360 | LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein | O.I. | H.G. | S.X. | |
| 0.28 | 31.1 | Os05g0474900 | At1g01470 | - | Uncharacterized Cys-rich domain containing protein | 5e-9 | At3g10980 | unknown protein | O.I. | H.G. | S.X. | |
| 0.26 | 25.6 | Os03g0639600 | At1g01470 | - | Zinc-finger protein Lsd1 | 4e-5 | At4g20380 | zinc finger protein (LSD1) | O.I. | H.G. | S.X. | |
| 0.25 | 24.1 | Os01g0706400 | At1g01470 | - | Eukaryotic protein of unknown function DUF292domain containing protein | 8e-6 | At2g19710 | unknown protein | O.I. | H.G. | S.X. | |
| 0.22 | 19.4 | Os01g0672400 | At1g01470 | - | Drought induced 19 family protein | 3e-1 | At4g32090 | galactosyltransferase | O.I. | H.G. | S.X. | |
| 0.21 | 17.9 | Os05g0138300 | At1g01470 | - | Hydrophobic protein RCI2A (Low temperature andsalt responsive protein LTI6A) | 5e-1 | At5g01940 | eukaryotic translation initiation factor 2B family protein / eIF-2B family protein | O.I. | H.G. | S.X. | |
| 0.20 | 16.5 | Os03g0160100 | At1g01470 | - | EDR1 (Fragment) | 9e-58 | At1g08720 | EDR1 (ENHANCED DISEASE RESISTANCE 1) | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os07g0569700 | At1g01470 | - | Zn-finger, C2H2 type domain containing protein | 3e-1 | At5g09270 | unknown protein | O.I. | H.G. | S.X. | |
| 0.15 | 10.3 | Os03g0440900 | At1g01470 | - | LRR protein | 9e-3 | At5g21090 | leucine-rich repeat protein, putative | O.I. | H.G. | S.X. | |
| 0.13 | 8.2 | Os07g0573300 | At1g01470 | - | FYVE finger-containing phosphoinositide kinase (EC2.7.1.68) (1- phosphatidylinositol-4-phosphate 5-kinase)(PIP5K) (PtdIns(4)P-5- kinase) (PIKfyve) (p235). Spliceisoform p235S | 3e-9 | At1g20110 | zinc finger (FYVE type) family protein | O.I. | H.G. | S.X. | |
| 0.12 | 7.2 | Os06g0663400 | At1g01470 | - | - | 2e-17 | At2g24360 | serine/threonine/tyrosine kinase, putative | O.I. | H.G. | S.X. | |
| 0.12 | 7.2 | Os03g0318600 | At1g01470 | - | Transcription factor HBP-1b(c38) | 4e-15 | At5g06950 | AHBP-1B | O.I. | H.G. | S.X. | |
| 0.10 | 5.7 | Os10g0476400 | At1g01470 | - | Snf7 family protein | 2e-34 | At1g03950 | VPS2.3 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2.3) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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