Co-expression analysis

Gene ID	Zm.1975.1.S1_at
Gene name	pectinesterase-1
Homology with Arabidopsis	Similar to At3g05610: pectinesterase family protein (HF=7e-3)
Module size	6 genes
NF	0.09
%ile	5.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	75.1	0.89	Zm.1975.1.S1_at	BF729513	pectinesterase-1	-	7e-3	At3g05610	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.89	Zm.9881.1.A1_at	BM347704	hypothetical protein LOC100273660	-	3e-1	At4g17245	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.89	Zm.783.1.S1_at	AY105282.1	-	-	1e-1	At2g17420	NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)	O.I.	H.G.	S.X.	Please select
0.07	2.9	0.89	Zm.7707.1.S1_a_at	CK985938	Hypothetical protein LOC100193555	-	1e-2	At4g37210	tetratricopeptide repeat (TPR)-containing protein	O.I.	H.G.	S.X.	Please select
0.05	1.9	0.90	Zm.6479.1.A1_at	BM080358	-	-	8e-18	At5g22750	RAD5	O.I.	H.G.	S.X.	Please select
0.03	1.1	0.89	Zm.2132.1.S1_at	BM381800	hypothetical protein LOC100274542	-	6e-1	At5g03790	HB51	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
24.5	99.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.6	99.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.4	99.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.2	99.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.9	99.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.4	99.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.8	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.6	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.2	98.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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