Co-expression analysis

Gene ID Zm.1967.1.A1_at
Gene name pathogenesis-related protein 10 /// pathogenesis-related protein 1
Homology with ArabidopsisSimilar to At1g77180: chromatin protein family (HF=1e-23)
Module size 6 genes
NF 0.64
%ile 85.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.90Zm.1967.1.A1_atBG836522pathogenesis-related protein 10 /// pathogenesis-related protein 1-1e-23At1g77180chromatin protein familyO.I.H.G.S.X.
0.6785.80.90Zm.13283.1.S1_atCA826693--4e+0At1g04778unknown proteinO.I.H.G.S.X.
0.6179.50.89Zm.11909.1.A1_atBM381708--4e+0At5g42146unknown proteinO.I.H.G.S.X.
0.5065.70.92Zm.11663.1.A1_atCO531620hypothetical protein LOC100273622-2e+0At4g28170unknown proteinO.I.H.G.S.X.
0.5065.70.93Zm.1506.1.A1_atX82184.1defence-related protein-1e-1At3g04720PR4 (PATHOGENESIS-RELATED 4)O.I.H.G.S.X.
0.4455.70.94Zm.9567.1.S1_atBM378205--5e-10At5g10780-O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5369.10.87Zm.11955.1.A1_atBM382121--4e+0At1g49030unknown proteinO.I.H.G.S.X.
0.4048.50.88Zm.17561.1.A1_atCK369961hypothetical protein LOC100193307-2e+0At4g08190Ras-related GTP-binding protein, putativeO.I.H.G.S.X.
0.3538.90.89Zm.17138.1.A1_atCO525701hypothetical protein LOC100273926-7e-12At1g59520CW7O.I.H.G.S.X.
0.3437.20.89Zm.9191.1.A1_atBM350157hypothetical protein LOC100279424-6e-4At4g40100ABA-responsive protein-relatedO.I.H.G.S.X.
0.3131.60.90Zm.5261.1.A1_atCF041434hypothetical protein LOC100273065-2e-37At2g41540GPDHC1O.I.H.G.S.X.
0.2928.10.84Zm.7813.1.A1_atAY106898.1--1e-1At4g08230glycine-rich proteinO.I.H.G.S.X.
0.2724.60.86Zm.10332.1.A1_a_atBQ048110--2e+0At3g28990unknown proteinO.I.H.G.S.X.
0.2622.70.73Zm.10185.1.A1_atBM379817hypothetical protein LOC100276084-2e+0At2g17705unknown proteinO.I.H.G.S.X.
0.2419.80.84Zm.15773.1.A1_a_atCK369842hypothetical protein LOC100275691-4e+0At1g13260RAV1O.I.H.G.S.X.
0.2318.60.85Zm.11827.1.A1_atBM381077hypothetical protein LOC100192043-4e+0At3g55820-O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.799.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.598.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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