Co-expression analysis

Gene ID Zm.1967.1.A1_at
Gene name pathogenesis-related protein 10 /// pathogenesis-related protein 1
Homology with ArabidopsisSimilar to At1g77180: chromatin protein family (HF=1e-23)
Module size 6 genes
NF 0.64
%ile 85.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.90Zm.1967.1.A1_atBG836522pathogenesis-related protein 10 /// pathogenesis-related protein 1-1e-23At1g77180chromatin protein familyO.I.H.G.S.X.
0.6785.80.90Zm.13283.1.S1_atCA826693--4e+0At1g04778unknown proteinO.I.H.G.S.X.
0.6179.50.89Zm.11909.1.A1_atBM381708--4e+0At5g42146unknown proteinO.I.H.G.S.X.
0.5065.70.92Zm.11663.1.A1_atCO531620hypothetical protein LOC100273622-2e+0At4g28170unknown proteinO.I.H.G.S.X.
0.5065.70.93Zm.1506.1.A1_atX82184.1defence-related protein-1e-1At3g04720PR4 (PATHOGENESIS-RELATED 4)O.I.H.G.S.X.
0.4455.70.94Zm.9567.1.S1_atBM378205--5e-10At5g10780-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.799.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.598.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.20883.3.S1_at, orthologous to the query gene, Zm.1967.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.2Ta.20883.3.S1_atAt1g77180--4e+0At1g30990major latex protein-related / MLP-relatedO.I.H.G.S.X.
0.5072.4TaAffx.29371.1.S1_atAt1g77180--4e+0At5g18310unknown proteinO.I.H.G.S.X.
0.4058.4TaAffx.51397.1.S1_atAt1g77180--4e-49At1g23490ATARF1 (ADP-RIBOSYLATION FACTOR 1)O.I.H.G.S.X.
0.2735.6TaAffx.11641.1.S1_atAt1g77180--3e-6At4g00830RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.0910.4TaAffx.3664.1.S1_atAt1g77180--2e+0At2g47710universal stress protein (USP) family proteinO.I.H.G.S.X.
0.089.4TaAffx.112158.1.S1_atAt1g77180--2e+1At3g28590unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera



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