| Gene ID | Zm.1967.1.A1_at |
| Gene name | pathogenesis-related protein 10 /// pathogenesis-related protein 1 |
| Homology with Arabidopsis | Similar to At1g77180: chromatin protein family (HF=1e-23) |
| Module size | 6 genes |
| NF | 0.64 |
| %ile | 85.9 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 85.8 | 0.90 | Zm.1967.1.A1_at | BG836522 | pathogenesis-related protein 10 /// pathogenesis-related protein 1 | - | 1e-23 | At1g77180 | chromatin protein family | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.90 | Zm.13283.1.S1_at | CA826693 | - | - | 4e+0 | At1g04778 | unknown protein | O.I. | H.G. | S.X. | |
| 0.61 | 79.5 | 0.89 | Zm.11909.1.A1_at | BM381708 | - | - | 4e+0 | At5g42146 | unknown protein | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.92 | Zm.11663.1.A1_at | CO531620 | hypothetical protein LOC100273622 | - | 2e+0 | At4g28170 | unknown protein | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.93 | Zm.1506.1.A1_at | X82184.1 | defence-related protein | - | 1e-1 | At3g04720 | PR4 (PATHOGENESIS-RELATED 4) | O.I. | H.G. | S.X. | |
| 0.44 | 55.7 | 0.94 | Zm.9567.1.S1_at | BM378205 | - | - | 5e-10 | At5g10780 | - | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 15.7 | 99.0 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 14.5 | 98.9 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 13.3 | 98.8 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.8 | 98.7 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.7 | 98.7 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.9 | 98.6 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.3 | 98.5 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.0 | 98.4 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.1 | 98.0 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.4 | 92.2 | GSM320460 | protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.9 | Os03g0300400 | At1g77180 | - | Pathogen-related protein (JIOsPR10) | 1e-1 | At3g14420 | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | O.I. | H.G. | S.X. | |
| 0.25 | 24.1 | Os03g0597600 | At1g77180 | - | L-asparaginase (EC 3.5.1.1) (L-asparagineamidohydrolase) | 4e-2 | At5g08100 | L-asparaginase / L-asparagine amidohydrolase | O.I. | H.G. | S.X. | |
| 0.25 | 24.1 | Os01g0231800 | At1g77180 | - | Conserved hypothetical protein | 2e+0 | At3g16220 | - | O.I. | H.G. | S.X. | |
| 0.13 | 8.2 | Os12g0162100 | At1g77180 | - | MAP kinase-like protein | 6e-8 | At3g18750 | WNK6 (WITH NO K (=LYSINE) 6) | O.I. | H.G. | S.X. | |
| 0.07 | 3.7 | Os02g0187800 | At1g77180 | - | Cinnamyl-alcohol dehydrogenase (EC 1.1.1.195)(CAD) (Brown-midrib 1 protein) | 1e-2 | At3g19450 | ATCAD4 | O.I. | H.G. | S.X. | |
| 0.05 | 2.5 | Os04g0640600 | At1g77180 | - | Shikimate kinase | 3e-1 | At2g21940 | shikimate kinase, putative | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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