Co-expression analysis

Gene ID Zm.194.1.S1_at
Gene name embryo surrounding region2 /// hypothetical protein LOC100275090
Homology with ArabidopsisSimilar to At1g35255: unknown protein (HF=1e+0)
Module size 10 genes
NF 0.15
%ile 10.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6986.50.91Zm.194.1.S1_atX98498.1embryo surrounding region2 /// hypothetical protein LOC100275090-1e+0At1g35255unknown proteinO.I.H.G.S.X.
0.5065.70.94Zm.18330.1.A1_atCO526416hypothetical protein LOC100192759-6e-1At5g57490VDAC4 (VOLTAGE DEPENDENT ANION CHANNEL 4)O.I.H.G.S.X.
0.4658.40.93Zm.11947.1.A1_atBM382038hypothetical protein LOC100277020-4e+0At4g35410clathrin adaptor complex small chain family proteinO.I.H.G.S.X.
0.1912.80.94Zm.2814.1.A1_atCB833930zinc finger C-x8-C-x5-C-x3-H type family protein-3e+0At5g08100L-asparaginase / L-asparagine amidohydrolaseO.I.H.G.S.X.
0.1710.60.95Zm.17924.2.S1_a_atAI677447--8e-17At3g22590RNA pol II accessory factor Cdc73 family proteinO.I.H.G.S.X.
0.147.70.94Zm.17442.1.A1_atCK347197hypothetical protein LOC100279110-6e+0At3g54570calmodulin-binding protein-relatedO.I.H.G.S.X.
0.115.30.94Zm.9001.2.S1_atAY111746.1--8e-5At2g28660copper-binding family proteinO.I.H.G.S.X.
0.083.40.94Zm.15333.1.S1_atCO519768hypothetical protein LOC100216740-3e-6At3g07940zinc finger and C2 domain protein, putativeO.I.H.G.S.X.
0.051.90.95Zm.13217.1.A1_atAI065901hypothetical protein LOC100273064-1e+0At1g31500endonuclease/exonuclease/phosphatase family proteinO.I.H.G.S.X.
0.041.50.93Zm.11379.1.A1_atCB351163--5e+0At2g29995unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.899.1GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
10.698.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
8.898.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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