Co-expression analysis

Gene ID Zm.19355.1.A1_at
Gene name STIP1 homology and U box-containing protein 1
Homology with ArabidopsisSimilar to At3g14820: carboxylesterase/ hydrolase, acting on ester bonds / lipase (HF=2e+0)
Module size 13 genes
NF 0.44
%ile 52.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5775.10.96Zm.19355.1.A1_atBG549786STIP1 homology and U box-containing protein 1-2e+0At3g14820carboxylesterase/ hydrolase, acting on ester bonds / lipaseO.I.H.G.S.X.
0.6785.80.97Zm.8865.1.A1_atBM267927hypothetical protein LOC100191271-3e-9At5g35460unknown proteinO.I.H.G.S.X.
0.5469.80.96Zm.13856.1.S1_atAF439727.1formate tetrahyrofolate ligase-9e-58At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)O.I.H.G.S.X.
0.5469.80.97Zm.17628.1.S1_atCN845468--6e-17At2g34560katanin, putativeO.I.H.G.S.X.
0.4861.30.97Zm.4304.1.S1_atAI834719--1e-3At3g18600DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.4861.30.97Zm.5273.1.A1_atBM497669hypothetical protein LOC100272886-7e-1At2g39990EIF2O.I.H.G.S.X.
0.4556.40.96Zm.38.1.S1_atM60215.1ser/thr protein phosphatase1-1e-12At2g29400TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)O.I.H.G.S.X.
0.4455.70.97Zm.17366.1.S1_s_atCK371241--1e+1At5g20060phospholipase/carboxylesterase family proteinO.I.H.G.S.X.
0.4352.80.96Zm.7938.1.A1_atBM079591glycosyltransferase-7e+0At5g42567-O.I.H.G.S.X.
0.3336.00.97Zm.6863.2.A1_atCF637783hypothetical protein LOC100193970-7e-67At1g48410AGO1 (ARGONAUTE 1)O.I.H.G.S.X.
0.3233.40.97Zm.1056.1.S1_atAW120162ribosomal protein S22 homolog-3e-17At5g6230040S ribosomal protein S20 (RPS20C)O.I.H.G.S.X.
0.3233.40.96Zm.18819.1.S1_atCO522421hypothetical protein LOC100193533-1e+0At5g65730xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeO.I.H.G.S.X.
0.3131.60.96Zm.3620.1.S1_atAW076176--5e+0At5g28610-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.598.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.698.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM375795Deep-sowing 10d treatment Control, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing conditionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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