Co-expression analysis

Gene ID Zm.19324.1.A1_at
Gene name hypothetical protein LOC100279823
Homology with ArabidopsisSimilar to At3g13065: SRF4 (STRUBBELIG-RECEPTOR FAMILY 4) (HF=6e-3)
Module size 6 genes
NF 0.22
%ile 16.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.94Zm.19324.1.A1_atCK986141hypothetical protein LOC100279823-6e-3At3g13065SRF4 (STRUBBELIG-RECEPTOR FAMILY 4)O.I.H.G.S.X.
0.8094.00.94Zm.19325.1.S1_atCO528653hypothetical protein LOC100191211-5e-5At1g45249ABF2 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2)O.I.H.G.S.X.
0.2115.50.97Zm.6045.7.A1_a_atCK347781hypothetical protein LOC100216946 /// guanine nucleotide-binding protein beta subunit-like protein-3e-8At1g18080ATARCAO.I.H.G.S.X.
0.1710.60.97ZmAffx.693.1.A1_atAI737419hypothetical protein LOC100191981-8e-1At5g24130unknown proteinO.I.H.G.S.X.
0.104.60.97Zm.9238.1.A1_atCO533275--5e-2At2g23320WRKY15O.I.H.G.S.X.
0.072.90.95Zm.18438.1.S1_atCD97919150S ribosomal protein L11-1e-1At1g32990PRPL11 (PLASTID RIBOSOMAL PROTEIN L11)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.998.2GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
6.497.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
5.697.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.696.4GSM375795Deep-sowing 10d treatment Control, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing conditionLink to GEO
4.496.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM206332Lower pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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