Co-expression analysis

Gene ID Zm.19284.1.A1_at
Gene name hypothetical protein LOC100274557
Homology with ArabidopsisSimilar to At3g51010: unknown protein (HF=2e-1)
Module size 14 genes
NF 0.42
%ile 49.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7288.60.94Zm.19284.1.A1_atCO524123hypothetical protein LOC100274557-2e-1At3g51010unknown proteinO.I.H.G.S.X.
0.5775.10.96Zm.2520.1.A1_atAW400289hypothetical protein LOC100191754-5e-21At3g49680BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3)O.I.H.G.S.X.
0.5775.10.96Zm.1961.1.A1_atBM379423Glutathione S-transferase12-2e+0At4g26620sucrase-relatedO.I.H.G.S.X.
0.5775.10.97Zm.19172.1.A1_atCO528850hypothetical protein LOC100274312-7e-3At1g55740AtSIP1 (Arabidopsis thaliana seed imbibition 1)O.I.H.G.S.X.
0.5674.40.95Zm.5373.1.S1_atBF728005hypothetical protein LOC100276438-1e+0At5g26170WRKY50O.I.H.G.S.X.
0.5571.60.96Zm.16525.3.A1_x_atAI738309deoxy xylulose synthase 2-7e-44At5g56010HSP81-3O.I.H.G.S.X.
0.5369.10.95Zm.5608.1.A1_atAY107668.1--8e+0At4g17650aromatic-rich family proteinO.I.H.G.S.X.
0.4455.70.97Zm.4044.1.A1_a_atAY109936.1hypothetical protein LOC100273897 /// hypothetical protein LOC100274738-5e+0At5g13780GCN5-related N-acetyltransferase, putativeO.I.H.G.S.X.
0.4048.50.97Zm.13032.1.A1_atAY107007.1--2e+0At1g68907-O.I.H.G.S.X.
0.3029.80.97Zm.8367.1.A1_atBM073854--5e+0At3g57810OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.2928.10.97Zm.7746.1.A1_atCF636114reticulon-4e-2At3g19460reticulon family protein (RTNLB11)O.I.H.G.S.X.
0.2318.60.96Zm.822.1.A1_atCO526761--2e+0At5g60490FLA12O.I.H.G.S.X.
0.2014.20.96Zm.719.2.S1_atBG320289thioredoxin M1-4e-1At1g11684unknown proteinO.I.H.G.S.X.
0.2014.20.96Zm.6232.1.A1_atAI673989hypothetical protein LOC100274265-9e-44At3g17810dihydroorotate dehydrogenase family protein / dihydroorotate oxidase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.999.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.198.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM205366B73 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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