Co-expression analysis

Gene ID Zm.19267.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g14590: isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative (HF=1e-1)
Module size 10 genes
NF 0.30
%ile 27.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8294.60.96Zm.19267.1.A1_atCO521479--1e-1At5g14590isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putativeO.I.H.G.S.X.
0.4759.90.98Zm.14272.2.A1_atD10622.1corn cystatin I-6e-7At5g05110cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.3945.60.97Zm.5048.6.A1_a_atBM380925hypothetical protein LOC100279926 /// endoplasmin-3e-36At4g24190SHD (SHEPHERD)O.I.H.G.S.X.
0.2928.10.97Zm.1029.1.A1_atCO522544--7e-1At5g09460transcription factor/ transcription regulatorO.I.H.G.S.X.
0.2724.60.97Zm.1719.1.S1_atAW400223--7e-1At2g0125060S ribosomal protein L7 (RPL7B)O.I.H.G.S.X.
0.2724.60.98Zm.8751.1.A1_atBM348137--1e+0At3g05700-O.I.H.G.S.X.
0.2318.60.97Zm.15820.1.S1_atAY270041.1Na+/H+ antiporter NHX6-9e-7At3g05030NHX2 (SODIUM HYDROGEN EXCHANGER 2)O.I.H.G.S.X.
0.2014.20.98Zm.6968.1.A1_atAI065873apurinic endonuclease-redox protein-2e+0At3g077503' exoribonuclease family domain 1-containing proteinO.I.H.G.S.X.
0.1811.60.97Zm.7709.1.A1_atBM269078hypothetical protein LOC100280092-5e-1At1g71695peroxidase 12 (PER12) (P12) (PRXR6)O.I.H.G.S.X.
0.1710.60.96Zm.6595.1.A1_atAI629743Hypothetical protein LOC100191605-4e-1At1g25375metallo-beta-lactamase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.599.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
26.399.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
26.299.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
25.699.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
25.599.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
21.499.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.099.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.599.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.499.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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