Co-expression analysis

Gene ID	Zm.19203.1.S1_at
Gene name	hypothetical protein LOC100193957
Homology with Arabidopsis	Similar to At3g07220: transcriptional activator, putative (HF=1e-5)
Module size	6 genes
NF	0.85
%ile	99.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.98	Zm.19203.1.S1_at	CO520849	hypothetical protein LOC100193957	-	1e-5	At3g07220	transcriptional activator, putative	O.I.	H.G.	S.X.	Please select
0.91	99.0	0.98	Zm.19204.1.S1_at	CA404362	protein phosphatase 2C-like	-	1e-3	At1g09160	protein phosphatase 2C-related / PP2C-related	O.I.	H.G.	S.X.	Please select
0.91	99.0	0.98	Zm.3450.1.A1_at	AW066723	hypothetical protein LOC100191605	-	4e+0	At2g38695	unknown protein	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.98	Zm.6692.1.S1_at	CA409229	hypothetical protein LOC100193785	-	3e-24	At3g24530	AAA-type ATPase family protein / ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.99	Zm.7332.1.S1_at	CF013037	kinesin-like protein9	-	2e-24	At3g16630	KINESIN-13A	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.98	Zm.7334.1.S1_at	CD975420	kinesin-like protein16	-	2e-25	At5g41310	kinesin motor protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.7	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.4	97.0	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.2	96.9	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.0	96.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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