Co-expression analysis

Gene ID Zm.19192.1.A1_at
Gene name hypothetical protein LOC100279895
Homology with ArabidopsisSimilar to At3g24180: catalytic/ glucosylceramidase (HF=1e-14)
Module size 12 genes
NF 0.04
%ile 2.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.80.89Zm.19192.1.A1_atCO529513hypothetical protein LOC100279895-1e-14At3g24180catalytic/ glucosylceramidaseO.I.H.G.S.X.
0.147.70.96Zm.13313.1.S1_atCF631669hypothetical protein LOC100274302-1e-1At2g19670PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A)O.I.H.G.S.X.
0.115.30.96Zm.4.1.S1_atCD434423ferredoxin3-2e+0At1g10960ATFD1 (FERREDOXIN 1)O.I.H.G.S.X.
0.062.30.95Zm.18346.1.S1_atCO524222--2e+0At5g48250zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.062.30.94Zm.1998.1.S1_atAW562996HGA4-7e-4At3g18170transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.051.90.95Zm.18189.1.S1_atCN844773hypothetical protein LOC100278018-6e+0At1g51402unknown proteinO.I.H.G.S.X.
0.051.90.95Zm.9344.1.A1_atCK826773--6e+0At4g14010RALFL32 (ralf-like 32)O.I.H.G.S.X.
0.031.10.92Zm.17268.1.S1_atCK369015pro-resilin-3e+0At5g01970unknown proteinO.I.H.G.S.X.
0.031.10.94Zm.13226.2.A1_a_atCF01290440S ribosomal protein S9-1e-41At5g3985040S ribosomal protein S9 (RPS9C)O.I.H.G.S.X.
0.031.10.94Zm.9562.1.S1_atD88452.1aldehyde oxidase-2-4e-5At5g20960AAO1 (ARABIDOPSIS ALDEHYDE OXIDASE 1)O.I.H.G.S.X.
0.031.10.96Zm.7463.1.A1_atBM078503hypothetical protein LOC100276250-2e+0At1g21090hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.020.70.93Zm.17719.1.S1_atCK370127hypothetical protein LOC100278756-4e+0At4g31930mitochondrial glycoprotein family protein / MAM33 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.198.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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