Co-expression analysis

Gene ID Zm.19181.2.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At3g56900: aladin-related / adracalin-related (HF=4e-3)
Module size 18 genes
NF 0.22
%ile 17.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.98Zm.19181.2.S1_a_atCF634947--4e-3At3g56900aladin-related / adracalin-relatedO.I.H.G.S.X.
0.3336.01.00Zm.13228.1.S1_atCA452580LHT1-5e+0At4g17585unknown proteinO.I.H.G.S.X.
0.3233.40.99Zm.6874.1.S1_atBM080052Hypothetical protein LOC100193230-4e-3At1g47490ATRBP47C (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47C)O.I.H.G.S.X.
0.3029.80.99Zm.2763.1.S1_atAW067129hypothetical protein LOC100191545-9e-7At1g19710glycosyl transferase family 1 proteinO.I.H.G.S.X.
0.2928.11.00Zm.15242.1.A1_atBM340075--1e+1At3g16712unknown proteinO.I.H.G.S.X.
0.2521.30.99Zm.6234.2.S1_atAI881460--8e-7At2g30110ATUBA1O.I.H.G.S.X.
0.2419.80.99Zm.8311.2.A1_a_atBM073622--4e+0At4g23090unknown proteinO.I.H.G.S.X.
0.2318.61.00Zm.7054.1.S1_atBM331766actin-depolymerizing factor 6-6e-4At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)O.I.H.G.S.X.
0.2318.60.99Zm.5661.1.A1_atAY107527.1--1e+0At2g33585unknown proteinO.I.H.G.S.X.
0.2014.21.00Zm.2805.1.A1_atAW352682hypothetical protein LOC100274443-5e+0At4g13266unknown proteinO.I.H.G.S.X.
0.1811.60.99Zm.16328.1.S1_atCD568892bile acid sodium symporter-3e-3At4g12030bile acid:sodium symporter family proteinO.I.H.G.S.X.
0.1710.60.99Zm.3473.1.A1_atAY103936.1hypothetical protein LOC100279183-5e+0At5g22160unknown proteinO.I.H.G.S.X.
0.158.60.99Zm.6339.1.A1_atAI691450--3e-1At5g11930glutaredoxin family proteinO.I.H.G.S.X.
0.158.60.99ZmAffx.877.1.S1_atAI770795--8e-1At5g16240acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.H.G.S.X.
0.158.61.00Zm.5813.1.A1_atCF056763hypothetical protein LOC100191474-8e-32At5g55310TOP1BETA (DNA TOPOISOMERASE 1 BETA)O.I.H.G.S.X.
0.147.70.99Zm.11196.1.A1_atBM379862hypothetical protein LOC100275201-1e+0At5g64160unknown proteinO.I.H.G.S.X.
0.125.90.99Zm.11753.1.A1_atBM380473--4e+0At3g18518RTFL20 (ROTUNDIFOLIA LIKE 20)O.I.H.G.S.X.
0.094.00.99Zm.14471.1.A1_a_atCF01721060S ribosomal protein L7-1-8e-31At2g4412060S ribosomal protein L7 (RPL7C)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.198.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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