Co-expression analysis

Gene ID	Zm.19135.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g17730: anac057 (Arabidopsis NAC domain containing protein 57) (HF=2e-1)
Module size	9 genes
NF	0.34
%ile	35.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.96	Zm.19135.1.A1_at	CO526574	-	-	2e-1	At3g17730	anac057 (Arabidopsis NAC domain containing protein 57)	O.I.	H.G.	S.X.	Please select
0.82	94.6	0.97	Zm.4044.2.S1_at	AI834066	-	-	2e+0	At5g13780	GCN5-related N-acetyltransferase, putative	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.97	Zm.19127.1.A1_at	AY110588.1	-	-	2e-3	At4g01660	ATABC1 (ARABIDOPSIS THALIANA ABC TRANSPORTER 1)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.97	Zm.16687.1.S1_at	CF636696	hypothetical protein LOC100194066	-	3e-3	At5g07250	ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.97	Zm.380.1.A1_at	AF052076.1	photosystem I complex PsaH subunit precursor	-	8e-13	At3g16140	PSAH-1 (photosystem I subunit H-1)	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.98	Zm.12930.1.S1_at	CA403471	hypothetical protein LOC100191377	-	3e-3	At4g31790	diphthine synthase, putative (DPH5)	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.97	Zm.2147.1.A1_a_at	BM380613	glycine-rich cell wall structural protein	-	4e-1	At4g01995	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.97	Zm.13055.1.S1_at	CF637576	-	-	2e-14	At4g14540	NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.97	Zm.10652.1.S1_at	CN844569	hypothetical protein LOC100191856	-	4e-2	At1g23040	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.3	99.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.1	99.0	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.0	98.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.4	98.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.2	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.1	98.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.9	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.4	92.2	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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