Co-expression analysis

Gene ID Zm.19093.1.S1_at
Gene name para-hydroxybenzoate--polyprenyltransferase
Homology with ArabidopsisSimilar to At4g23660: AtPPT1 (Arabidopsis thaliana polyprenyltransferase 1) (HF=3e-1)
Module size 12 genes
NF 0.52
%ile 67.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5775.10.92Zm.19093.1.S1_atCO529011para-hydroxybenzoate--polyprenyltransferase-3e-1At4g23660AtPPT1 (Arabidopsis thaliana polyprenyltransferase 1)O.I.H.G.S.X.
0.7590.80.94Zm.1502.1.A1_atCF637870flavonoid O-methyltransferase-2e+0At3g09032unknown proteinO.I.H.G.S.X.
0.6481.70.95Zm.633.1.A1_atAF126742.1bundle sheath defective2-4e-1At5g19850hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.6381.10.94Zm.6049.1.S1_atAY103705.1--5e-7At3g09400PLL3O.I.H.G.S.X.
0.5875.10.95Zm.6625.1.A1_x_atAY104547.160S ribosomal protein L9-1e-16At1g33140PGY2 (PIGGYBACK2)O.I.H.G.S.X.
0.5571.60.95Zm.6421.1.A1_atAI834083--1e-9At2g46380unknown proteinO.I.H.G.S.X.
0.5267.30.95Zm.3911.1.A1_atCA401442--7e-25At3g45040phosphatidate cytidylyltransferase family proteinO.I.H.G.S.X.
0.5267.30.95Zm.12718.2.A1_atAY106773.1SET domain protein 113-6e+0At5g53742-O.I.H.G.S.X.
0.4861.30.96Zm.3821.1.A1_atCF635078--1e+0At4g27950CRF4 (CYTOKININ RESPONSE FACTOR 4)O.I.H.G.S.X.
0.4455.70.95Zm.16931.1.A1_s_atAI714400hypothetical protein LOC100279421-3e-1At5g46610unknown proteinO.I.H.G.S.X.
0.4149.70.95Zm.4654.1.A1_a_atAI666008hypothetical protein LOC100272406-2e-4At1g72210basic helix-loop-helix (bHLH) family protein (bHLH096)O.I.H.G.S.X.
0.2521.30.94Zm.1882.1.S1_atCK986211late embryogenesis abundant protein-5e+0At4g21720unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.099.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.999.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.099.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.899.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.998.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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